Corynebacterium urogenitale: CUROG_08940
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Entry
CUROG_08940 CDS
T07467
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cuo
Corynebacterium urogenitale
Pathway
cuo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cuo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CUROG_08940 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuo03021
]
CUROG_08940 (rpoC)
03400 DNA repair and recombination proteins [BR:
cuo03400
]
CUROG_08940 (rpoC)
Enzymes [BR:
cuo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CUROG_08940 (rpoC)
Transcription machinery [BR:
cuo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CUROG_08940 (rpoC)
DNA repair and recombination proteins [BR:
cuo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CUROG_08940 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DDE_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QFQ03136
UniProt:
A0A5J6Z844
LinkDB
All DBs
Position
complement(2013068..2017036)
Genome browser
AA seq
1322 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
QCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAANIITSVDEEGRHNDQSTLEAEMMLEKKEVEADRDAELAERAQKLEED
LAELEAAGAKNDAKKKVQTAAEREMRHIRERSEREIDRLDEIWNTFVKLAPKQMIVDENI
YNELVDRYEDYFTGGMGAEAIQTLIRNYDLEAEAEALREVIRDGKGQKKLRALKRLKVVA
AFLRSGNDPAAMILDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMLDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKLMALELFKPFVMKRLVEKSYAQNIKSAKRMVERQR
AEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPILVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSSEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTLQKGKDEFGGQ
GAYEPATEEGPEKGVYSSLAEAIMAYDRGTLGLQAPIKVRINHLRPSAEIEAELFPDGWQ
RGQTWLAETTLGRVLFNELLPWNYPYVEGVMAKKPQAVVINDLAAKYPMITVAQTVDKLK
DAGFYWATRSGVTITMHDVLVLPNKQEVLDSYEAKAHVIEKKLARGKINETERYQSLVDL
WKEATDFVGESVEALYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVTNSRGEYITRPVK
TSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTSQGI
VLPVAEAVLDAEGNKTDTFVRADFVETSVVGRYLASDATGANGEVILSKGEVIGEQDLDI
LVAAGVEEVKVRSVLTCATATGLCSTCYGKSMATGKKVEIGEAVGIVAAQSIGEPGTQLT
MRTFHLGGVGGDITGGLPRVQELFEARVPKAKSPIASVDGTVKIEDDETFYTLTIVPDDG
SDDVVYEKLSKRQGLATLNTGGAERPIRDGDHVKMGQQLLKGSADPHEVLRVLGRRGVQQ
HLINEVQKVYRDQGVAIHDKHIEIIVRQMLRRVTVIDSGSTEFLPGSLVEHADAVAASKE
AVKSGGRPVEVRAEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENV
IIGKLIPAGTGIARYRNITVEPTEEARAAAYSIPSTYGDGFYGDDGYGEFTGAAVPLDDM
DL
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacttcttcgacgagcttcgcattggcctggccaccgctgacgacatc
cgtcgttggtcccgtggcgaggtaaagaagcccgaaacgatcaactaccgtaccctcaag
cctgagaaggacggtctattctgcgagcgcattttcggtccaacccgcgactgggagtgc
cagtgtggcaagtacaagcgtgtccggtacaagggcatcatctgtgagcgctgtggcgtc
gaggtgaccaagtccaaggtgcgccgtgagcgcatgggccacatcgagctcgctgcccct
gtcacccacatctggtacttcaagggcgttccatcccgcctgggttacctgctggacctg
gctccgaaggatctcgagaagatcatctacttcgcggcgaacatcatcacctccgtggac
gaggagggtcgtcacaacgaccagtccaccctcgaggccgagatgatgctggagaagaag
gaagtcgaggccgaccgcgacgctgagctggccgagcgtgcccagaagctggaagaggac
ctcgccgagctcgaggccgccggcgctaagaacgacgctaagaagaaggtgcagaccgcc
gctgagcgcgagatgcgccacattcgcgagcgctccgagcgcgagatcgaccgcctcgac
gaaatctggaacaccttcgtcaagctggccccgaagcagatgattgtcgacgagaacatc
tacaacgagctcgtcgaccgctacgaggactacttcaccggcggcatgggcgccgaggcg
atccagactctcatccgcaactacgacctcgaggctgaggccgaggctctgcgtgaggtc
attcgcgacggcaagggccagaagaagctgcgtgccctcaagcgtctgaaggtcgttgct
gccttcctacgctccggcaacgatcctgcggcgatgatcttggactgcatcccagtgatc
ccacctgagctgcgtccaatggttcagctggacggcggccgctttgcgacctccgacctc
aatgacctctaccgtcgtgtgatcaaccgcaacaaccgcctcaagcgcatgcttgacctc
ggtgcgccggagatcatcgtgaataacgagaagcgcatgctgcaggagtctgtggatgca
ctcttcgacaatggtcgccgtggccgcccggtcaccggtccaggcaaccgtccgcttaag
tccctgtccgatctgctcaagggcaagcagggccgtttccgtcagaacctgcttggtaag
cgcgtggactactctggtcgttccgtgattatcgttggtccgcagctgaagctgcaccag
tgtggtctgccaaagctgatggctctggagctgttcaagccattcgtgatgaagcgtctg
gtagagaagagctacgcgcagaacatcaagtccgctaagcgcatggtggagcgccagcgc
gctgaggtgtgggacgttctggaagaggccattgctgagcacccagtgatgctcaaccgt
gcaccaaccctgcaccgcctgggtatccaggctttcgagccaatcctggtcgagggtaag
gcgatccagctgcacccactggcctgtgaggcgttcaacgctgacttcgacggtgaccag
atggcagtgcacctgccgctgtcctccgaggcgcaggccgaggctcgcatcctgatgctg
gcttccaacaacatcctctccccagcgtccggtaagccactggctatgccacgtctggac
atggtgaccggcctgtactacctgaccctgcagaagggcaaggacgagttcggtggccag
ggtgcctacgagccagctaccgaagagggtccagagaagggcgtgtacagctcccttgct
gaggccatcatggcctacgaccgtggcacgctgggcctgcaggctccaattaaggtgcgc
atcaaccacctgcgtccaagcgctgagattgaggctgagctcttcccggatggctggcag
cgtggccagacctggctggcggagaccaccctgggtcgcgtgctgttcaacgagctgctg
ccgtggaactacccatacgtcgagggtgtcatggcgaagaagccacaggctgttgtcatt
aacgacctcgcggcgaagtacccgatgatcaccgtcgcgcagaccgtggacaagctcaag
gatgccggtttctactgggcaacccgttccggtgtgaccatcaccatgcacgacgtgctg
gtgcttccgaacaagcaggaagtcctggactcttacgaggccaaggctcatgtcatcgag
aagaagctggcccgcggcaagatcaacgagaccgagcgctaccagtccctcgttgacctg
tggaaggaagcgaccgacttcgtgggtgagtccgtcgaggctctgtacccagacgacaac
ccaattccgatgatcgtgaagtccggtgctgccggtaacatgcgtcagatttggaccctg
gccggcatgaagggcatggtgaccaactcccgcggtgagtacatcacccgtccggtgaag
acctccttccgcgagggcctgtccgtgctcgagtacttcaacaactcccacggttcccgt
aagggcctggccgatacggcactgcgtaccgcggactccggttacctgacccgtcgtctc
gtcgacgtggcacaggatgtcatcgtccgcgaggacgactgtggcacctctcagggcatc
gtcctgccagtggcagaggctgtcctcgatgccgagggcaacaagaccgataccttcgtg
cgcgcggacttcgtcgagacctccgtcgtcggccgttacctcgcttccgacgccaccggc
gccaatggtgaggtcatcctctccaagggcgaagtcatcggcgagcaggacctcgatatc
ctcgtggccgctggcgtcgaagaggttaaggtccgatccgttctgacctgtgctaccgca
accggcctgtgctccacctgctacggcaagtccatggctacgggcaagaaggttgaaatc
ggtgaggcagtgggcatcgtcgctgcacagtccattggtgagcctggtacccagctgaca
atgcgtaccttccacctcggtggcgtgggtggcgacatcaccggtggtctgcctcgtgtc
caggagctcttcgaggctcgcgtgccgaaggcgaagtccccaatcgcttccgtcgacggc
accgtcaagatcgaggacgacgagactttctacaccctcaccatcgttcctgatgatggc
tccgatgatgtggtgtacgagaagctctccaagcgtcagggtctggcaacgctgaacacc
ggcggcgctgagcgtccgatccgcgatggtgaccacgtgaagatgggccagcagctgctc
aagggctccgctgacccacacgaggtgcttcgcgtcctcggccgccgtggtgtgcagcag
cacctgatcaacgaagtgcagaaggtctaccgcgaccagggcgtggcgatccacgacaag
cacatcgagatcatcgtgcgccagatgctgcgccgcgtgacggtcatcgactccggttcc
accgagttcctgccgggttccctggtggagcacgccgacgctgtggctgcttccaaggaa
gccgtcaagtccggtggacgccctgtcgaggtccgtgcggagatcatgggtattaccaag
gcctccctggccaccgagtcctggctgtccgcggcctccttccaggagaccactcgtgtt
ctcacggatgctgcgatcaacaagcgctccgacaagctcatcggcctgaaggagaacgtg
atcatcggtaagctcatcccagctggtaccggtatcgcccgctaccgcaacatcacggtg
gagccaacggaggaggcacgcgctgcggcctactctatcccatccacctacggtgatggc
ttctacggcgacgatggctacggtgagttcaccggcgctgctgtcccactggatgacatg
gacctctaa
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