Cupriavidus malaysiensis: BKK80_01440
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Entry
BKK80_01440 CDS
T04978
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cup
Cupriavidus malaysiensis
Brite
KEGG Orthology (KO) [BR:
cup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cup03032
]
BKK80_01440
03400 DNA repair and recombination proteins [BR:
cup03400
]
BKK80_01440
Enzymes [BR:
cup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BKK80_01440
DNA replication proteins [BR:
cup03032
]
Prokaryotic type
DNA Topoisomerases
BKK80_01440
DNA repair and recombination proteins [BR:
cup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BKK80_01440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
GBR_NSP5
Motif
Other DBs
NCBI-ProteinID:
AOZ04653
LinkDB
All DBs
Position
1:341608..344133
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AA seq
841 aa
AA seq
DB search
MTEQQKPQQENSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGYCTEIQVTIHTDNSISIVDNGRGIPPDVKFDDKHEPKRSAAEIAMTELHAGGKFNQNS
YKVSGGLHGVGVSCVNALSKWLRLTVRRDGKVHLLEFAQGAVQNRLVESATGTDGQPVEV
SPMKVTGATDKRGTEVHFLADEAIFTNVEFHYEVLSKRIRELSFLNNGVHIRLTDQRTGK
EEDFAFSGGVKGFVEYINRAKTTLHPTIFYANAEKDGIAVEVAMQWNDGYNEQVLCFTNN
IPQRDGGTHLTGLRAAMTRVINKYIEENEIAKKAKVETTGDDMREGLACVLSVKVPEPKF
SSQTKDKLVSSEVRLPVEELVSKALTDFLLETPADAKIICSKIVDSARAREAARKAREMT
RRKGVLDGIGLPGKLADCQEKDPAMSELFLVEGDSAGGSAKQGRDRKFQAILPLKGKILN
VERARFDKMLSSQEVLTLITALGTGIGKDDYNLDKLRYHRIIIMTDADVDGSHIRTLLLT
FFYRQMPDIIERGYVYIAQPPLYKVKHGKEERYIKDDTELNAYMLRLALEKAALARPDGS
EISGEALGELARQYQLAEGVIGRLSRIVDSDALRAIADGITLDLDSAAAAEASAVALKAK
LAEMHAKTLSGAAVNNDGTADVYAQFDEKTDKHRLMIARRQHGNVRLSHLDADFVHGADY
AALAKAAQTFQGLIPDGTKVRRGEGDKQRDQTVGDFHAAMTWLLSEAERGVSRQRYKGLG
EMNPEQLYETTLDVTQRRLLKVQIEDAIAADQIFTTLMGDEVEPRRNFIESNALVARNID
V
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacagcagaaaccgcaacaggaaaacagctacggagcctcctcgatccagatc
ctggaaggcctggaggcggtgcgcaagcgtcccggcatgtacatcggcgacacctccgac
ggcaccggcctgcaccacctcgtgttcgaggtgctggacaactccatcgacgaggcgctg
gccggctactgcaccgagatccaggtcaccatccacaccgacaactcgatctcgatcgtc
gacaacggccgcggcatcccgcccgacgtcaagttcgacgacaagcacgagcccaagcgc
agcgcggccgagatcgccatgaccgagctgcacgccggcggcaagttcaaccagaacagc
tacaaggtctccggcggcctgcacggcgtgggcgtgtcctgcgtcaacgcgctgtccaag
tggctgcgcctgaccgtgcgccgcgacggcaaggtccacctgctcgagttcgcccagggc
gcggtgcagaaccgcctggtcgagagcgccaccggcaccgacggccagccggtcgaagtc
tcgccgatgaaggtgaccggcgccaccgacaagcgtggcaccgaggtgcacttcctcgcc
gacgaggccatcttcaccaacgtcgagttccactacgaggtgctgtccaagcgcatccgc
gagctctccttcctcaacaacggtgtgcacatccggctgaccgaccagcgcaccggcaag
gaagaggacttcgccttctcgggcggggtcaagggcttcgtcgagtacatcaaccgcgcc
aagaccacgctgcacccgaccatcttctacgccaatgccgagaaggacggcatcgcggtg
gaagtggccatgcagtggaacgacggctacaacgagcaggtgctctgcttcaccaacaac
attccgcagcgcgatggcggcacccacctgaccggcctgcgcgcggcgatgacgcgcgtc
atcaacaagtacatcgaagagaacgagatcgccaagaaggccaaggtcgagaccaccggc
gacgacatgcgcgaaggcctggcctgcgtgctgtcggtcaaggtgcccgagcccaagttc
agctcgcagaccaaggacaagctggtctcgtccgaagtgcgcctgccggtggaagagctg
gtctccaaggcgctgaccgacttcctgctggaaacgccggccgacgccaagatcatctgc
agcaagatcgtcgactcggcgcgcgcgcgcgaagccgcgcgcaaggcgcgcgagatgacg
cgccgcaagggcgtgctggacggcatcggcctgcccggcaagctggccgactgccaggag
aaggacccggccatgtccgaactgttcctggtcgagggtgactccgcaggcggctccgcc
aagcagggccgcgaccggaagttccaggccatcctgccgctcaagggcaagatcctcaac
gtcgagcgcgcccgcttcgacaagatgctgtcgagccaggaagtgctgacgctgatcacc
gcgctcggcaccggcatcggcaaggacgactacaacctcgacaagctgcgctaccaccgc
atcatcatcatgaccgatgcggacgtcgacggctcgcacatccgcacgctgctgctgacc
ttcttctaccgccagatgcccgacatcatcgagcgcggctacgtctacatcgcgcagccg
ccgctgtacaaggtcaagcacggcaaggaagagcgctacatcaaggacgacaccgagctc
aacgcctacatgctgcgcctggcgctggagaaggccgccctggcgcgccccgacggcagc
gagatcagcggcgaagcgctgggtgaactggcccgccagtaccagctcgccgaaggcgtg
atcggccgcctgtcgcgcatcgtcgacagcgacgcgctgcgcgccatcgccgacggcatc
acgctcgacctcgacagcgccgccgccgccgaggcctccgccgtggcgctcaaggccaag
ctcgccgagatgcacgccaagacgctcagcggcgccgccgtcaacaacgatggcaccgcc
gacgtctacgcccagttcgacgagaagaccgacaagcaccgcctgatgatcgcgcgccgc
cagcacggcaacgtgcgcctgtcgcacctggacgccgacttcgtccacggcgccgactac
gccgcgctggccaaggccgcccagaccttccagggcctgatccccgacggcaccaaggtg
cgccgcggcgagggcgacaagcagcgcgaccagaccgtgggcgacttccacgccgccatg
acctggctgctgtccgaagccgaacgcggcgtctcgcgccagcgctacaagggcctgggc
gagatgaaccccgagcagctctacgaaaccacgctggacgtgactcagcgccgcctgctc
aaggtgcagatcgaagacgccatcgcggccgaccagatcttcaccacgctgatgggcgac
gaggtggaaccgcgccgcaacttcatcgagagcaatgcgctggtggcgcggaatatcgac
gtttga
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