Cupriavidus malaysiensis: BKK80_06530
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Entry
BKK80_06530 CDS
T04978
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cup
Cupriavidus malaysiensis
Pathway
cup03030
DNA replication
cup03430
Mismatch repair
cup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKK80_06530
03430 Mismatch repair
BKK80_06530
03440 Homologous recombination
BKK80_06530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cup03032
]
BKK80_06530
03400 DNA repair and recombination proteins [BR:
cup03400
]
BKK80_06530
Enzymes [BR:
cup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKK80_06530
DNA replication proteins [BR:
cup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKK80_06530
DNA repair and recombination proteins [BR:
cup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKK80_06530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AOZ05498
LinkDB
All DBs
Position
1:1512063..1515563
Genome browser
AA seq
1166 aa
AA seq
DB search
MSAPRFVHLRLHSEYSVVDGIVRLEDAVKAAAADGMGALALTDLANAFGLIRFYKEARGG
GVKPLVGADVWLTNADDRDKAPRLQLLVQDRRGYLNLCTLLSRAWLVNQYRGRAEIDPGW
FEEPGEGGEPLATGLIALSGAMGGDIGMALANGNPAGAERAAQHWAALFPQRFYIELQRA
GHAGTESYVQQAVQLAAALRLPVVATHPVQFMTPDDYTAHEARTCIAEGELLANPRRTRR
FTTDQYFKTQDEMCALFADIPSALQNTVEIARRCNLTLELGKPRLPLFPTPDGMSLDDYL
VHMAKEGLEKRLEILFPDAAEREAKRPEYYERLEFETGTIIKMGFPGYFLIVADFINWAK
NNGVPVGPGRGSGAGSLVAYALGITDLDPLKYALLFERFLNPERVSMPDFDIDFCQHGRD
RVITYVKEKYGKDAVSQIATFGTMAAKAAVRDVGRVLDLGYGFVDGVAKLIPFKPGKLVT
IEEAKKEEPLLTERENNEEEVRQLLELAQRVEGMTRNVGMHAGGVLIAPGKLTDFCPLYT
QGDDGGVVSQYDKDDVEAAGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWNCSQIPLA
DAPAFDILKTANTVAVFQLESRGMQGMLKDAKPDRFEDIIALVALYRPGPMDLIPSFCAR
KHGREKVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEE
MAKHRELFREGADKNGLSGEKADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHP
AEFMAANMSLAMDDTDKVKILFEDCKLNGLKLLPPDINASEYRFAPTDAKTIRYGLGGIK
GSGQGAIEDILRAREERPFDDLFDFCERVDRRQVNRRTMEALIRAGAFDSLNSNRAQMLA
SVSRAMEAAEQKAESANQVSLFDLMGDAGDAHKPELVDEPFWPPKRTLQEEKQALGYYFS
GHLFDAYRDEVRRFVKGTLAALEKEVQGNGGGYGRDVRGKTIAGVITGIRTQMTQRGKML
IVLVDDGTAQIEMTVFNELFDANRHMFKEDELLIATGNARHDTFTGGVRFTAESVLDLVA
ARGRFAEAVALSFNGNASLQRLRELLTPHLAGEAGGPGLPVRVSYAAASAQCEAILGRQW
AVTPSDEALASFREALSSENVSMVYG
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaccccgcttcgtacacctccgcctgcactccgaatattctgtcgtcgatggc
atcgtccgcctcgaggacgccgtcaaggccgccgcggccgacggcatgggagcgctcgcc
ctgaccgacctcgccaacgccttcggcctgatccgcttctacaaggaagcgcgcggcggc
ggcgtcaagccgctggtcggcgccgacgtctggctgaccaacgccgatgaccgcgacaag
gcgccgcggctgcaattgctggtgcaggaccgccgcggttacctgaacctgtgtaccctg
ctgtcgcgtgcctggctggtcaaccagtatcgcggccgcgccgagatcgacccgggctgg
ttcgaagagccgggcgaaggcggtgagccgctggccaccggcctgatcgcgctgtccggc
gccatgggcggcgacatcggcatggcgctggccaacggcaacccggccggcgccgaacgt
gccgcgcagcactgggcggcactttttccgcagcgcttctatatcgaactgcagcgcgcc
ggccacgccggtacggaaagctatgtgcagcaggcggtgcagctggccgccgcactgcgg
ctgccggtggtggccacgcatccggtgcagttcatgacaccggacgactacacggcgcac
gaggcccgcacctgcatcgccgagggcgagctgctggccaacccgcgccgcacgcgccgc
ttcaccaccgaccagtacttcaagacacaggacgagatgtgcgcgctgttcgccgacatc
ccgtcggcgctgcagaacaccgtcgagatcgcgcgccgctgcaacctgacgctggaactg
ggcaagccgcgcctgccgctgttcccgacgccggacggcatgtcgctcgacgactacctg
gtgcacatggccaaggaaggcctggagaagcgcctcgaaatcctgttcccggatgcggcc
gagcgcgaggcgaagcggcccgagtattacgagcggctggaattcgagaccggcaccatc
atcaagatgggcttccccggctacttcctgatcgtggcggacttcatcaactgggccaag
aacaacggcgtgccggtgggtccggggcggggctccggggctggttcgctggtcgcctac
gcgctgggcatcaccgatctcgacccgctcaagtacgcgctgctgttcgagcgtttcctg
aacccggagcgggtgtcgatgcccgacttcgatatcgacttctgccagcacgggcgcgat
cgcgtgatcacctacgtgaaggagaagtatggcaaggacgcggtgtcgcagattgccacc
ttcggcaccatggcggccaaggcggcggtgcgcgacgtgggccgcgtgcttgacctgggc
tacggcttcgtcgacggcgtcgccaagctgattccgttcaagccgggcaaactggtcacc
atcgaggaagcgaagaaagaagagccgctgctgaccgagcgcgagaacaacgaggaagag
gtccgccagttgctggagctggcacagcgcgtcgagggcatgacgcgcaacgtcggcatg
cacgccggcggcgtgctgatcgcacccggcaagctgaccgacttctgtccgctctacacg
cagggcgacgacggtggcgtggtcagccagtacgacaaggatgacgtcgaggccgccggc
ctggtcaagttcgacttcctgggcctgaccacgctgaccatcctcgactgggccgagcgc
tacatccggcgcctcgaccccagcaaggccgactggaactgcagccagattccgctcgcc
gacgcccctgccttcgatatcctgaagaccgccaatacggtggcggtgttccagctggaa
agccgcggcatgcagggcatgctgaaggatgccaagcccgaccgcttcgaggacatcatc
gcactggtggcactctaccgcccgggcccgatggacctgatccccagcttctgcgcgcgc
aagcacggccgcgagaaggtggagtacccggatccgcgcgtcgagccggtgctcaaggag
acctacggcatcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggcggc
tactcgctgggcggcgccgacctgctgcgccgcgccatgggcaagaagaagcccgaggaa
atggccaagcatcgcgagctgttccgcgaaggggccgacaagaacggcctgagcggcgag
aaggccgacgagatcttcgacctgatggagaagttcgcgggctacggcttcaacaagtcg
cacgcggccgcctacgctctgctggcctactacacggcctggctcaaggcgcaccacccg
gccgaattcatggcagccaacatgtcgctggcgatggacgacaccgacaaggtgaagatc
ctgttcgaggactgcaagctgaacggactcaagctgctgccgccggacatcaatgccagc
gaataccgtttcgccccgaccgacgccaagaccatccgctacggcctgggcggcatcaag
ggctcggggcagggtgctatcgaggacatcctgcgcgcgcgcgaggaacgtcccttcgat
gacctgttcgacttctgcgagcgcgtcgatcgtcgccaggtcaaccgccgcaccatggag
gcactgatccgggcaggagccttcgacagcctcaacagcaaccgcgcgcagatgctggcg
tcggtctcgcgtgcgatggaggcggcggaacagaaggcggaatcggccaatcaggtatcg
ctgttcgacctcatgggtgacgccggcgatgcgcacaagccggagctggtcgacgagccg
ttctggccgcccaagcgcacgctgcaggaagaaaagcaggcactcggctactacttctcc
ggccacttgttcgatgcctaccgcgacgaagtccggcgcttcgtcaagggcacactggcc
gcgctggagaaggaggtgcagggtaacggcggcggctacggccgcgacgtgcgcggcaag
accatcgccggcgtgatcaccggcatccgtacccagatgacccagcgcggcaagatgctg
atcgtgctggtcgacgatggcacggcgcagatcgagatgacagtcttcaacgagctgttc
gacgccaaccgccacatgttcaaggaagacgaactgctgatcgccaccggcaacgcgcgc
cacgacacctttaccggcggcgtgcgctttaccgcggaatcggtgctggacctggtcgcc
gcccgcggccgttttgccgaagcggtcgctttgtccttcaacggcaatgcgtcgctgcag
cggctgcgcgaattgctgacgccgcacctggccggcgaggccggcggccccggactgccg
gtgcgtgtcagctacgccgccgccagtgcgcaatgcgaggccatcctcggccggcagtgg
gcagtgacgccgtcggacgaggcgctcgccagcttccgcgaggccttgtcgagcgagaat
gtcagcatggtctatggttga
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