Cupriavidus malaysiensis: BKK80_16420
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Entry
BKK80_16420 CDS
T04978
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cup
Cupriavidus malaysiensis
Pathway
cup03420
Nucleotide excision repair
cup03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BKK80_16420
03430 Mismatch repair
BKK80_16420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cup03400
]
BKK80_16420
Enzymes [BR:
cup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKK80_16420
DNA repair and recombination proteins [BR:
cup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKK80_16420
MMR (mismatch excision repair)
Other MMR factors
BKK80_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AOZ07227
LinkDB
All DBs
Position
1:3632721..3635066
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AA seq
781 aa
AA seq
DB search
MPDLLANLNAEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQNGHVSPAGILAVTF
TNKAAKEMQTRLSAMLPVNTRAMWIGTFHGLCNRMLRAHFRDAGLPQTFAILDSQDQLSA
LKRLLKAHNVDDEKYPAKNLQYFINNAKEQGLRPADVEANDDFNKRFVDLYAAYDEQCQR
EGVVDFAELLLRCYELLRYNDAIRQHYQHRFRHILVDEFQDTNVLQYQWLKLLAGFGTQH
PAAVFAVGDDDQSIYAFRGANVGNMRDFEHEFRVRRLIKLEQNYRSHGHILDSANHLISH
NARRLGKNLRTDAGHGEPVRVFQADSDGREAAWLLDEIRDQVAQGASRSEIAILYRSNAQ
SRVIEHALFSAGIPYRVYGGLRFFERAEIKHALAYLQLLENPRNDAAFGRVVNFPTRGIG
ARSLETLQDAARQYNCSLFEAVAYVPGKAGSTLGAFVRLIEQMRADTRRMTLPETVEHVT
NTSGLVTHYQGEKEGQDRIENLQELVTAAQAFVVEEGYGLDALAAVLPAEPAGTRALAAG
DQVQQVLDPEALPVVMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKGLEFDVVFI
TGLEEGLFPHENSMMDPDGLEEERRLMYVAITRARKRLYLSFAQSRVLHGQMRYHVRSRF
FEELPDAALKWLTPPAAGPGSQPRRQNEGGWGRDWFKKPEDVPFTGSKPTGGMDRGNNYA
NAQREAGSGFRIGQGVFHNKFGEGVITALEGSGADARANINFKRHGAKWLALAVAKLDPI
D
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgccagacctgctcgccaatctcaacgccgaacaactcgccgccgtcaccctgcccgac
gaaccggccctgatcctggcgggcgcgggcagcggcaagacgcgcgtgctgaccacccgc
atcgcctggctgatccagaacggccacgtctcgccggccggcatcctggcggtgaccttc
accaacaaggccgccaaggaaatgcagacgcgcctgtcggccatgctgcccgtcaacacg
cgcgcgatgtggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcacttc
cgcgacgccgggctgccgcagaccttcgccatcctggacagccaggaccagctctccgcc
ctcaagcggctgctcaaggcgcacaacgtcgacgacgagaagtacccggccaagaacctg
cagtacttcatcaacaatgccaaggagcaggggctgcgcccggccgacgtcgaggccaac
gacgacttcaacaaacgcttcgtcgacctctacgccgcctacgacgagcagtgccagcgc
gagggcgtggtcgacttcgccgaactgctgctgcgctgctacgaactgctgcgctacaac
gacgccatccgccagcactaccagcaccgcttccgccatatcctggtcgacgagttccag
gacaccaacgtgctgcagtaccagtggctcaagctgctggcgggcttcggcacgcagcat
ccggcggcggtgttcgcggtgggcgacgacgaccagagcatctatgccttccgcggcgcc
aacgtcggcaatatgcgcgacttcgaacacgagttccgcgtgcgccggctgatcaagctg
gaacagaactaccgctcgcacgggcacatcctggactcggccaaccacctgatctcgcac
aatgcgcgccgcctcggcaagaacctgcgtaccgacgccggccacggcgagccggtgcgc
gtgttccaggccgactccgacgggcgcgaagcggcctggctgctcgacgagatccgcgac
caggtggcacagggcgccagccgctccgagatcgccatcctctaccgcagcaacgcgcag
tcgcgcgtgatcgagcatgcgctgttctcggccggcatcccctaccgggtctacggcggc
ctgcgcttcttcgagcgcgcggaaatcaagcacgcgctggcctacctgcagctgctggag
aacccgcgcaacgacgctgccttcggccgcgtggtcaacttccccacgcgcggcatcggt
gcgcgctcgctggaaacgctgcaggacgccgcgcgccagtacaactgctcgctgttcgag
gcggtcgcctacgtgccgggcaaggccggcagcacgctcggcgccttcgtgcggctgatc
gagcagatgcgcgccgacacgcgccgcatgacgctgcccgagacggtcgagcacgtcacc
aacacgagcggcctggtcacccactaccagggtgagaaggaaggccaggaccgcatcgag
aacttgcaggaactggtgacggcggcgcaggccttcgtggtcgaggaaggctacggcctg
gatgcgctcgccgccgtgctgcccgccgaaccggcaggcacgcgggccctcgccgcgggc
gaccaggtccagcaggtgctggacccggaagcgctgccggtggtgatgacgccgctggtc
gccttcctcacgcacgcctcgctggaggcgggcgacaaccaggcccaggcaggccaggac
gcggtgcagatgatgaccgtgcatgccgccaagggcctggagttcgacgtggtcttcatc
accgggctggaagaaggcctgttcccgcacgagaacagcatgatggacccggacggcctg
gaggaagagcgccgcctgatgtatgtggccatcacgcgcgcgcgcaagcgcctctacctg
tccttcgcgcagagccgcgtgctgcacggccagatgcgctaccacgtgcgctcgcgcttc
ttcgaagaactgcccgacgcggcactcaaatggctgactccgcccgccgccggccccggc
agccagccgcgccggcagaacgaaggcggctgggggcgcgactggttcaagaagccggag
gacgtgcccttcactggcagcaaacccactggcggcatggaccgcggcaacaactacgcg
aacgcgcagcgcgaggccggcagtggcttccgcatcgggcagggggtgttccacaacaag
ttcggcgagggtgtgatcacggcgctggaaggcagtggcgcggatgcgcgcgccaatatc
aacttcaagcggcatggtgccaagtggctggcgttggctgtggctaagctggatcctatt
gattga
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