Cupriavidus malaysiensis: BKK80_18840
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Entry
BKK80_18840 CDS
T04978
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cup
Cupriavidus malaysiensis
Pathway
cup03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BKK80_18840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cup03400
]
BKK80_18840
Enzymes [BR:
cup01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BKK80_18840
DNA repair and recombination proteins [BR:
cup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BKK80_18840
Prokaryotic type
BKK80_18840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOZ07656
LinkDB
All DBs
Position
1:4162604..4163380
Genome browser
AA seq
258 aa
AA seq
DB search
MQSDLFAADTPARSTAQAPAAALQAQADALPPAWRTLLAPCLSGAGWRELAAFVDGEHAS
GKRVFPHDVFHALHLTPPDSVKVVILGQDPYHGVETVAGAEVPQAHGLAFSVPDGVRVPP
SLRNIFKEIAAEYGEAPARGASGNLEGWARQGVLLLNTVLTVEQGRAASHAKRGWEAVTD
CLIQALAGSRQKLVFLLWGSHAQAKKPLLGAGHCVLEAPHPSPLSAHRGFLGCGHFRQAN
DWLTAQGLAAVDWQAHRA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgatctcttcgctgcggacacgcccgcccgatccaccgcccaggcccccgcc
gccgcgctgcaggcccaggccgacgccctgccgccggcctggcgcacgctgctggccccc
tgcctgtccggcgccggctggcgcgaactggccgccttcgtcgacggcgagcacgccagc
ggcaagcgcgtgttcccgcacgacgtgttccacgcgctgcacctgacgccgcccgactcg
gtcaaggtcgtgatcctcggccaggatccctaccacggcgtcgagaccgtggccggcgcc
gaggtgccgcaggcccacggactggccttctcggtaccggacggcgtgcgggtgccgccc
agcctgcgcaatatcttcaaggaaatcgccgcggagtacggcgaggcgcccgcgcgcggc
gcctcgggcaacctcgagggctgggcccgccagggcgtgctgctgctcaacacggtgctg
accgtcgagcagggccgcgcggccagccacgccaagcgcggctgggaagcggtgaccgac
tgcctgatccaggcgctggccggcagccgccagaagctcgtgttcctgctgtggggcagc
catgcccaggcgaagaagccgctgctgggggcgggccactgcgtgctggaggcgccgcat
ccgtcgccgctgtcggcgcaccgaggcttccttggctgcggccacttccgccaggccaat
gactggctgacggcccaggggctggcagcggtcgactggcaggcgcaccgcgcctga
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