Cupriavidus malaysiensis: BKK80_19780
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Entry
BKK80_19780 CDS
T04978
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cup
Cupriavidus malaysiensis
Pathway
cup03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cup00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BKK80_19780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cup03021
]
BKK80_19780
03400 DNA repair and recombination proteins [BR:
cup03400
]
BKK80_19780
Enzymes [BR:
cup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BKK80_19780
Transcription machinery [BR:
cup03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BKK80_19780
DNA repair and recombination proteins [BR:
cup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BKK80_19780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AOZ07827
UniProt:
A0ABM6F866
LinkDB
All DBs
Position
1:complement(4353894..4358000)
Genome browser
AA seq
1368 aa
AA seq
DB search
MAYSFTEKKRIRKSFAKRATVHQVPFLLATQIESYTQFLQADTPTARRKSEGLQAAFNAI
FPIVSHNGLARMEFVSYHLSNPPFDVKECQQRGLTFHSALRAKVRLIINDRENPTKVKEV
KEQEVYMGEIPLMTSTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARII
PYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKSIGLTPEQILAHFFVFDNFTLQTEGA
QLEFVPERLRGEVARFDIVDKNGRVVVEKDKRINAKHIRDLDSAGTKLISVPEDYLLGRV
LAKNIIDPDTGEVIANANDELTETVLENLREAGVKQIQTLYTNDLDQGPYISQTLRTDDT
ADQTAARIAIYRMMRPGEPPTEEAVEALFQRLFYSEESYDLSRVGRMKVNSRLGRPSGEG
AMVLQDEDILETIKILVNLRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLSRVERAVK
ERLGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALGPG
GLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFLETPYRKVEN
SKLTDQVDYLSAIEEGKYVVAQANATVDAEGNLIDELVSAREGSERETRMVTPDRVQYID
VAPSQIVSAAASLVPFLEHDDANRALMGANMQRQAVPCLRPDKPLVGTGIERTVAVDSGT
AVQAMRGGVVDYVDAMRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPMVKVG
DIVARGDVVADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISERVVAEDRYTSIHIE
ELSVVARDTKLGPEEITRDISNLAEAQLARLDESGITYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGIVIDVQVFTREGVTRDKRAQSIIDDELK
RYRLDLNDQLRIVEGDAFQRLERLLVGKTVNGGPKKLSKGATLTKEYLAELDKYHWFDIR
PADEEVAAQLEAVKEAIEQKRHEFDLAFEEKRKKLTQGDELPPGVIKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPIEDMPYMADGTPADIVLNPLGVPSRMNVGQILETHLGWAA
RGLGERIGAMLKAQAKAQELRPLLAQVYNESGKAEDLDSLSDAEVLELATNLKKGVPFAT
PVFDGAHEDEIRRMLDLAYPSDVAKEKGLTASKQQVTLYDGRTGEAFERPVTLGVMHMLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVNGRTKVYENIVKGEHSIDAGMPESFNVLVKEIRSLGIDIDLDRY
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagcttcaccgaaaagaagcgcattcgcaaaagctttgcgaagcgcgcgacg
gtccatcaggttccattcctgcttgcgactcagattgaatcctacacccagtttttgcaa
gcggatacgccaaccgcgcgtcgcaagagcgaaggcctgcaggccgccttcaacgcaatc
ttcccgattgtgtcccataacggcctcgcccgcatggagttcgtctcctaccacctctcg
aacccgccgttcgacgtcaaggagtgtcaacagcgcggtctgaccttccactcggcgctg
cgtgccaaggtgcgcctgatcatcaacgatcgcgagaacccgaccaaggtcaaggaagtc
aaggaacaggaagtgtacatgggcgagattccgctcatgacctcgaccggctccttcgtg
atcaacggcaccgagcgtgtcatcgtgtcccagctgcaccgttcgccgggcgtgttcttc
gagcacgacaagggcaagacgcacagctcgggcaagctgctgttctccgcgcgcatcatc
ccctaccgcggttcgtggctggacttcgaattcgacccgaaggacatcctgtacttccgc
gtcgaccgccgtcgcaagatgccggtcacgatcctgctcaaatcgatcggcctgacgccg
gagcagatcctcgcgcatttcttcgtcttcgacaacttcacgctgcagaccgaaggtgcg
cagctcgagttcgtgcccgagcgcctgcgcggtgaagtcgcccgcttcgacatcgtcgac
aagaacggccgcgtggtcgtcgagaaggacaagcggatcaacgccaagcacatccgcgac
ctggactcggccggcaccaagctgatcagcgtgccggaagactacctgctgggccgcgtg
ctggccaagaacatcatcgaccccgacacgggcgaggtgatcgccaacgccaacgacgag
ctgaccgagaccgtgctggaaaacctgcgcgaagccggcgtcaagcagatccagaccctg
tacaccaacgacctggaccagggtccgtacatttcgcagaccctgcgtacggacgacacg
gccgaccagaccgcggcgcgcatcgccatctaccgcatgatgcgcccgggcgagccgccc
accgaggaggccgtcgaagcgctgttccagcgcctgttctacagcgaagagtcgtacgac
ctgtcgcgcgtgggccgcatgaaggtcaacagccgtctgggccgccccagcggcgaaggc
gccatggtgctgcaggacgaggacatcctcgagaccatcaagatcctggtcaacctgcgc
aacggcaagggcgaggtcgatgacatcgaccacctgggcaaccgtcgcgtgcgctgcgtc
ggtgaactggccgagaaccagttccgcgccggcctgtcgcgcgtcgagcgcgccgtcaag
gagcgcctcggccaggccgagaccgagaacctgatgccgcacgacctgatcaactcgaag
ccgatctcgtcggccatccgcgagttcttcggttcgtcgcagctgtcgcagttcatggac
cagaccaacccgctgtccgagatcacgcacaagcgccgtgtctccgcactgggcccgggc
ggtctgacccgcgagcgcgccggcttcgaagtccgcgacgtgcacccgacccactacggc
cgcgtctgcccgatcgaaacgccggaaggcccgaacatcggtctgatcaactcgctggca
ctgtatgcccgcctgaacgaatacggcttcctggaaacgccgtaccgcaaggtcgagaac
agcaagctgaccgaccaggtcgactacctgtccgcgatcgaggaaggcaagtacgtggtg
gcgcaggccaacgcgaccgtggatgccgagggcaacctgatcgacgagctggtgtcggcc
cgcgaaggatccgagcgcgagacccgcatggtcacgccggaccgcgtgcagtacatcgac
gtggcgccgtcgcagatcgtctcggcggcagcctcgctggtgccgttcctcgagcacgat
gacgcgaaccgtgcactgatgggcgcgaacatgcagcgccaggccgtgccctgcctgcgt
ccggacaagcccctggtcggtaccggcatcgagcgcaccgtcgcggtcgactcgggtact
gccgtgcaggccatgcgcggcggtgtggtggactacgtcgatgcgatgcgtatcgtgatc
cgggtcaacgacgacgaagccgtggccggcgaagtcggcgtggacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatggtcaaggtcggc
gacatcgtcgcccgcggcgatgtggtcgccgacggcgcgtcgaccgacctgggcgagctg
gcgctcggccagaacatgctggtcgcgttcatgccctggaacggctacaacttcgaggat
tcgatcctgatctcggagcgcgtggtcgccgaagaccgctacacctcgatccacatcgag
gaactgtcggtcgtggcccgcgacaccaagctcggacccgaggaaatcacgcgcgatatt
tcgaacctggccgaagcccagctggcgcgcctggacgagtcgggcatcacctacatcggt
gccgaggtggaagccggcgacgtgctggtgggcaaggtcacgccgaagggcgagacccag
ctgacgccggaagagaagctgctgcgcgcgatcttcggggagaaggcctcggacgtgaag
gacacctcgctgcgcgtgccttcgggcatgagcggcatcgtgatcgacgtgcaggtcttc
acccgtgaaggcgtgacgcgcgacaagcgcgcccagtcgatcatcgatgacgaactcaag
cgttaccgcctggacctgaacgaccagctgcgtatcgtggaaggcgatgccttccagcgt
ctggagcgcctgctggtcggcaagaccgtcaacggtggcccgaagaagctgtcgaagggt
gcgacgctgaccaaggagtacctggccgaactggacaagtaccactggttcgacatccgt
ccggccgacgaggaagtcgccgcccagctcgaggccgtcaaggaggccatcgagcagaag
cgccacgagttcgacctcgccttcgaagagaagcgcaagaagctgacccagggcgacgaa
ctgccgccgggcgtgatcaagatggtcaaggtctaccttgccgtcaagcgtcgcctgcag
cctggcgacaagatggcaggccgccacggtaacaagggtgtggtgtcgaagatcgtgccg
atcgaagacatgccctacatggccgacggcacccctgccgacatcgtgctgaacccgctc
ggcgtgccgtcgcggatgaacgtgggccagatcctggaaacccacctgggctgggccgcg
cgcggcctgggcgagcgcatcggcgcgatgctcaaggcacaggcgaaggcacaggaactg
cgtccgctgctggctcaggtctacaacgagagcggcaaggcggaagacctggacagcctg
tccgacgccgaagtgctggaactcgccaccaacctgaagaagggcgtgccgttcgcgacg
ccggtgttcgatggtgcgcatgaggacgagatccgccgcatgctggacctggcctacccg
agcgacgtggccaaggagaagggcctgaccgcctccaagcagcaagtcacgctgtatgac
ggccgcaccggcgaggcgttcgagcgtccggtcacgctgggtgtgatgcacatgctgaag
ctgcaccacttggtcgacgacaagatgcacgcgcgttcgaccggcccgtactccctggtg
acccagcagccgctgggcggcaaggcgcagttcggtggccagcgtttcggtgagatggaa
gtgtgggcgctggaagcctacggcgcctcctacgtgctgcaggagatgctgacggtcaag
tccgatgacgtgaacggccgtaccaaggtgtacgagaacatcgtcaagggcgagcactcg
atcgatgccggcatgccggagtcgttcaacgtgctggtgaaggaaatccgctcgctgggt
atcgacatcgacctcgatcgctactga
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integrated database retrieval system
