Cupriavidus malaysiensis: BKK80_21080
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Entry
BKK80_21080 CDS
T04978
Name
(GenBank) DNA repair exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cup
Cupriavidus malaysiensis
Brite
KEGG Orthology (KO) [BR:
cup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cup03400
]
BKK80_21080
DNA repair and recombination proteins [BR:
cup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BKK80_21080
Archaeal homologous recombinant proteins
BKK80_21080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_27
SMC_N
AAA_29
AAA_21
nSTAND3
ABC_tran
cobW
Motif
Other DBs
NCBI-ProteinID:
AOZ08454
LinkDB
All DBs
Position
2:266205..269264
Genome browser
AA seq
1019 aa
AA seq
DB search
MKPLWLAMQAFGPFAAREVIDFTQLGEHAFFLIHGPTGAGKTTVLDAICFALYGDTSGGE
RSAQDMRSANAAAGLRSEVELEFALGAQRYRIVRSPAQERPKLRGEGTVKEAARAQLDAL
EGGEWVSKASQPGRVDEFVRGLLGFDSTQFRQVIVLPQGRFRELLTADSKSRQAILERLF
HTELYRRVEDLLKTQAGELRRDAERIEIRRAELLQQHGLESTEALDARLAEALVQGTALH
EREGAARTALSLATLGLQQGEQAAAQLAEAAQAHAAHAALQARSAEVDAQRGRVRAAHQA
RAALPWLQRQRDAVVQGERAAQAVEAAALVLARRQEAARAAAAALAAQRERDPLRQQAQQ
QVVQLEGALTHARRLGQVRDALAAAQAAQARAATAHEQAQAQREQQEARLRQIETALETA
RATAAGAEAAALKLEAARQRTAVLAQHGEAGRACQRALAHQHAQAGRERSGAAALREARS
ALRAMEAAWLAGQAGRLAASLRAGDPCPVCGSLEHPSPSLPLEAGIEDAALEAARARVEQ
AEGEAGAAASAAQAAQAELLAAQARLAELERAVGAAGDAGAEAAARLAQQVEALEQGLAG
ARAAAAQAGTLEGQAATQRAALAAAQERLAAADTALRQSADQLAQRQGEWRAASEHVPEA
LREPEAVEQALQAARAGLAAAEAALQAAQAAEREATSALAAAGAAHGAAQAEAARQAAQV
AQAREAFAQALARAGFADAPALEAAGMEAAALERLEAALREFDLALAAAADRQARAATVA
AALQPPDLAALREAQARTQRELEALVAEQAALARAQQGLQACRQRLHELTAEAGGIEARF
AVLGRLSEVAAGNNPRRMSFQRFVLATLLDEVLEAASLRLVRMSRGRYELQRVREQGDKR
AAGGLDLEVFDHDTGLPRPASTLSGGEGFLASLSLALGLADVVQSRAGGIQLDTLFVDEG
FGTLDPESLDFAIRTLLDLQQAGRLVGVVSHVSELRERVDVRLEIRPGAQGSRAVLQLP
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgctgtggctggccatgcaggccttcggccccttcgccgcgcgcgaggtgatc
gatttcacgcagttgggagagcatgccttcttcctgatccacggtccgaccggcgcgggc
aagaccacggtgctcgacgcgatctgcttcgcgctgtacggcgacacctccggcggcgag
cgcagtgcccaggacatgcgcagcgccaatgccgcggcggggctgcgcagcgaagtcgag
ctggaattcgccctgggggcgcagcgctaccgcatcgtgcgctcgccggcgcaagagcgg
cccaagctgcgcggcgagggcacggtcaaggaggcggcgcgcgcccagctcgatgccctg
gagggcggcgagtgggtcagcaaggccagccagccgggccgtgtcgacgagttcgtgcga
ggcctgctgggcttcgacagcacgcagttccgccaggtcatcgtgctgccgcagggccgc
ttccgcgaactgctgacggcggattcgaagtcgcgccaggccatcctcgagcgcctgttc
catacggagctctaccggcgcgtggaggacctgctcaagacccaggcaggcgaactgcgc
cgcgatgccgagcgcatcgagatccggcgcgcggaactgctgcagcagcatgggctggaa
agcaccgaggcgctcgatgcgcggctggccgaggcgctcgtgcagggtaccgccctgcac
gagcgcgagggcgcggcacgcaccgcgctgtcgctggcgacgcttggcctgcagcaaggc
gagcaggcggccgcgcagctggccgaggcggcccaggcccatgccgcccacgccgccctg
caggcgcgcagcgccgaggtcgacgcgcagcgggggcgcgtgcgcgccgcgcaccaggcc
cgggcggcgttgccctggctgcagcgccagcgcgacgccgtggtacagggcgagcgcgcg
gcgcaggcggtcgaggccgccgcgctggtgctggcacggcggcaggaggcggcgcgcgcg
gcggcagcggcgctggcggcgcagcgggagcgcgatccgctgcgccagcaggcgcagcag
caggtggtccagctggagggtgcgctgacgcatgcgcgccgcctgggccaggtgcgcgat
gcgctggccgccgcgcaggcggcgcaggcgcgggccgccacggcgcatgaacaggcgcag
gcccagcgcgagcagcaggaggcgcggttgcggcagatcgagacggcgctggagacggcg
cgggcgaccgcggccggcgccgaggctgccgcgctcaagctcgaggccgcccgccagcgc
actgccgtgctggcgcagcacggcgaagccggccgagcctgccaacgggcgctggcccac
cagcacgcacaggccgggcgcgagcgcagcggcgcggcggcgctgcgcgaggcacgcagc
gcgctgcgtgccatggaggcggcgtggctggccgggcaggccgggcgcctggccgcgtca
ctgcgcgccggcgatccctgcccggtgtgcggcagcctggagcatccatcaccgtccctg
ccgctggaggccgggatcgaggatgcggcgctcgaggccgcacgcgcgcgggtggagcag
gcggaaggcgaggccggcgcagccgccagtgccgcgcaggcagcccaggccgagttgctg
gcggcccaggcgcgcctggccgagctggagcgtgcggtgggcgcggcgggtgacgccggc
gccgaagcggccgcgcggctggcgcagcaggtcgaggcgctggagcaagggctggccggt
gcgcgtgccgcggccgcgcaggccggcacgctggaggggcaggccgccacgcagcgcgcc
gcgctcgccgcggcgcaggagcgcctggcggcggcggacacggcgctgcgccagtcagcc
gatcaactggcgcagcggcagggcgaatggcgtgccgccagcgagcacgtgccggaagca
ttgcgcgagccggaggccgtggaacaggccctgcaggcggcgcgggccggacttgccgcg
gccgaggccgcgctgcaggccgcgcaggccgccgagcgcgaggccaccagcgccctggcg
gcggcgggcgccgcgcacggcgcggcccaagcggaggcggcgcgccaggcggcccaggtg
gcacaggcgcgcgaggctttcgcgcaggccctggcgcgggccggcttcgccgacgcgccg
gccctggaggcggcgggcatggaggcggccgccctggaaagactggaggcggcgctgcgc
gagttcgacctggcgctggccgccgccgccgaccggcaggcgcgcgccgccaccgtggcg
gcggcgctgcagccgcccgacctggccgcgctgcgggaggcgcaggcgcgcacgcagcgc
gaactcgaagccctggtcgccgagcaggccgcgctggcgcgcgcgcagcagggactgcag
gcttgccggcaacgcttgcacgagttgacggccgaggcgggtggcatcgaggcgcgcttt
gccgttctcggccgcctgtccgaggttgccgccggcaacaacccgcgccgcatgagcttc
cagcgcttcgtgctggcgacgctgctggacgaagtgctggaagcggcttcgctgcggctg
gtgcgcatgagccgcggccgctacgagctgcagcgcgtgcgcgaacagggcgacaagcgc
gcggccggcggcctggacctcgaagtcttcgaccacgataccggcctgccgcggccggcc
agcacgctgtccggcggggaaggcttcctggcctcgctgtcgctggcgctgggcctggcc
gacgtagtgcagtcgcgcgctggcggaatccagctcgatacgctattcgtggatgagggt
ttcggcacgctcgatccggagagcctcgacttcgccatccgcacgctgctggacctgcag
caggcggggcggctggtcggcgtggtgtcgcacgtcagcgaattgcgcgagcgcgtcgat
gtgcggctggagatccggccgggagcccagggcagccgcgcggttctgcaactgccttga
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