KEGG   Cupriavidus malaysiensis: BKK80_25985
Entry
BKK80_25985       CDS       T04978                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cup  Cupriavidus malaysiensis
Pathway
cup02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cup00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BKK80_25985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cup03021]
    BKK80_25985
Transcription machinery [BR:cup03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BKK80_25985
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF HTH_23 Sigma70_r4 HsdM_C HTH_Tnp_ISL3 HTH_24 GerE HTH_7 HTH_3 HTH_28 PhyR_sigma-like HTH_20 HTH_38 HTH_11 At4g18257_C TnsD
Other DBs
NCBI-ProteinID: AOZ09256
UniProt: A0ABN4TWL0
LinkDB
Position
2:1435598..1436107
AA seq 169 aa
MAAEAGIQQEIQALYRGHHDWLHGWLRRRLGCAHRAADLAHDTFMRLLAREEALQVLEPR
AFLSTVAQRVLANHWRREKLEQAYLEALACLPEPVVPSAEARAILLETLHEIDALLDGLP
VPVKRAFLMAQLDGMSQLEIAAALDISVTTVKRYLVRAGTQCYFAQAGA
NT seq 510 nt   +upstreamnt  +downstreamnt
atggccgccgaagcggggatacagcaggaaattcaggcgctttaccgcggtcaccacgac
tggctgcatggctggctgcggcgcaggctgggctgcgcgcaccgcgctgccgacctcgcc
cacgataccttcatgcgcctgctggcgcgcgaggaggcgctgcaggtcctggagccgcgc
gccttcctgtccaccgtggcgcaacgcgtgctcgccaaccactggcgccgcgagaagctg
gaacaggcctacctggaggcgctggcctgcctgcccgagccggtggtgccgtcggccgag
gcgcgcgccatcctgctggagaccctgcacgagatcgatgccttgctggacggcctgccg
gtgccggtcaagcgtgccttcctgatggcccagctcgacggcatgagccagctcgagatc
gccgccgcgctcgatatctccgtcaccaccgtcaagcgctacctggtgcgcgccggcacg
cagtgctatttcgcgcaggctggggcatga

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