Cupriavidus malaysiensis: BKK80_25985
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Entry
BKK80_25985 CDS
T04978
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cup
Cupriavidus malaysiensis
Pathway
cup02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cup00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BKK80_25985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cup03021
]
BKK80_25985
Transcription machinery [BR:
cup03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKK80_25985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
HTH_23
Sigma70_r4
HsdM_C
HTH_Tnp_ISL3
HTH_24
GerE
HTH_7
HTH_3
HTH_28
PhyR_sigma-like
HTH_20
HTH_38
HTH_11
At4g18257_C
TnsD
Motif
Other DBs
NCBI-ProteinID:
AOZ09256
UniProt:
A0ABN4TWL0
LinkDB
All DBs
Position
2:1435598..1436107
Genome browser
AA seq
169 aa
AA seq
DB search
MAAEAGIQQEIQALYRGHHDWLHGWLRRRLGCAHRAADLAHDTFMRLLAREEALQVLEPR
AFLSTVAQRVLANHWRREKLEQAYLEALACLPEPVVPSAEARAILLETLHEIDALLDGLP
VPVKRAFLMAQLDGMSQLEIAAALDISVTTVKRYLVRAGTQCYFAQAGA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaagcggggatacagcaggaaattcaggcgctttaccgcggtcaccacgac
tggctgcatggctggctgcggcgcaggctgggctgcgcgcaccgcgctgccgacctcgcc
cacgataccttcatgcgcctgctggcgcgcgaggaggcgctgcaggtcctggagccgcgc
gccttcctgtccaccgtggcgcaacgcgtgctcgccaaccactggcgccgcgagaagctg
gaacaggcctacctggaggcgctggcctgcctgcccgagccggtggtgccgtcggccgag
gcgcgcgccatcctgctggagaccctgcacgagatcgatgccttgctggacggcctgccg
gtgccggtcaagcgtgccttcctgatggcccagctcgacggcatgagccagctcgagatc
gccgccgcgctcgatatctccgtcaccaccgtcaagcgctacctggtgcgcgccggcacg
cagtgctatttcgcgcaggctggggcatga
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