Cupriavidus malaysiensis: BKK80_27030
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Entry
BKK80_27030 CDS
T04978
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cup
Cupriavidus malaysiensis
Pathway
cup02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cup00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BKK80_27030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cup03021
]
BKK80_27030
Transcription machinery [BR:
cup03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKK80_27030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
Sigma70_r4_2
Osteopontin
GerE
Motif
Other DBs
NCBI-ProteinID:
AOZ09422
UniProt:
A0ABN4TQ37
LinkDB
All DBs
Position
2:complement(1695282..1697243)
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AA seq
653 aa
AA seq
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MTSGAQRTAARTGQAGASKGLDGTGAGGTARPDPTLDAAERSLQLRALIQLGKQRGYLTH
ADISDHLQENFADTAAMEGIVATFAEMGVKIYEQTPDAETLLLSDNAVVVADDQADEEAE
VALSTVDSEFGRTTDPVRMYMREMSSATLLTRKQEVEIAKRIEDGLADMIHAISACPSTI
ATILDLSAKVSAEEMGIDDLVDGLSDESVAEAAVGAAVDSADTADSEERADDEDGDADDS
DDDDSSGQSAESDLRQLRDECLTRFGRVAEHFARMREDAGASAAASARDAVREELRAIRF
TARTIERLCADIQGMVDDVRVVERQVLQLLVERCGMPREDVIARFPGNETNLAWGKSLVA
DARPYSNAVARALPDLESYQQKLIDIQSRAALPLPELKAVNRRMLAAERQMRQAKHEMTQ
ANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGWKFSTYATWWVRQAVTR
AIADQARSIRVPVHMIEQINKLNRFAREIMQRTGKEADPAELAERMEMTEEKVRSILRIA
KEPISMETPVGEDGDTNLGDMIADSDTATPADAAMQASLREVVRELLDELSPREAKVLRM
RFGIDMATDYTLEEVGKQFDVTRERIRQIESKAMKKLRHPSRADQLITYLREN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcggcgcacaacgaacggcggccagaacaggacaggctggggccagcaagggc
ctcgatggaaccggcgcggggggcacggcacggcccgatcccacgctggatgccgctgaa
cgcagcctgcagttgcgcgcgctgatccagttgggcaagcagcgaggctacctcacccac
gccgatatcagcgaccacctccaggaaaacttcgccgacaccgcggcgatggagggcatc
gtagccaccttcgccgaaatgggcgtcaagatctacgagcagacccccgacgccgagacg
ctcctgctcagcgacaacgcggtggtcgtggccgatgaccaggccgacgaagaagccgag
gtcgcgctctcgacggtggactccgagttcggccgtacgaccgacccggtgcgcatgtac
atgcgcgagatgagctcggcgacgctgctgacgcgcaagcaggaagtcgagatcgccaag
cgcatcgaagacggcctggccgacatgatccatgcgatctcggcgtgtccctcgaccatc
gctaccatcctcgacctgtcggccaaggtgtccgccgaggaaatgggcatcgatgacctg
gtggatggcctgagcgacgaaagcgtggccgaggccgccgtgggtgccgccgtcgacagc
gccgacacggccgacagcgaggaacgcgccgacgatgaggacggggacgccgacgacagc
gacgacgacgacagctccggccagagcgcggagtccgacctgcgccagctgcgcgacgag
tgcctgacgcgcttcggccgtgttgccgagcacttcgcgcgcatgcgcgaggacgccggc
gccagcgcagccgcctcggcccgcgatgccgtgcgcgaagaactgcgggcgatccgcttc
accgcacgcaccatcgagcggctgtgcgccgacatccagggcatggtcgacgacgtgcgc
gtggtcgagcgccaggtgctccagttgctggtcgagcgctgcggcatgccgcgcgaagat
gtcatcgcccgcttccccggcaatgagaccaatcttgcctggggcaagtcgctggtcgcc
gacgcgcgcccgtacagcaacgccgtggcgcgcgcgctgcctgacctggagtcgtaccag
cagaagctgatcgacatccagtcccgcgccgccctgccgctgcccgagctgaaggccgtc
aaccgcaggatgctggccgccgagcggcagatgcgccaggccaagcacgagatgacccag
gccaacctgcgcctggtgatctcgatcgccaagaagtacaccaaccgcggcctgcagttc
ctcgacctgatccaggaaggcaatatcggcctgatgaaggcggtggacaagttcgagtac
cgccgcggctggaaattctccacctacgcgacctggtgggtgcgccaggccgtcacgcgc
gccatcgccgaccaggcccgctcgatccgcgtgccggtgcacatgatcgagcagatcaac
aagctcaaccgcttcgcgcgggagatcatgcagcgcaccggcaaggaagccgatccggcg
gaactggccgagcgcatggaaatgaccgaggagaaggtccgctcgatcctgcgcatcgcc
aaggaaccgatctcgatggagacgccggtcggcgaggatggcgacaccaacctcggcgac
atgatcgccgactcggacacggccacgccggccgatgccgccatgcaggccagcctgcgc
gaagtggtgcgggaactgctcgatgagctctcgccgcgcgaggccaaggtgctgcgcatg
cgcttcggcatcgacatggcgaccgactacacgctggaagaagtcggcaagcagttcgac
gtcacccgcgagcgcatccggcagatcgaaagcaaggcgatgaagaagctgcgccacccc
agccgcgcagaccagctgatcacctatctgcgggaaaattga
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