KEGG   Cupriavidus malaysiensis: BKK80_31415
Entry
BKK80_31415       CDS       T04978                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cup  Cupriavidus malaysiensis
Pathway
cup02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cup00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BKK80_31415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cup03021]
    BKK80_31415
Transcription machinery [BR:cup03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BKK80_31415
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF PhyR_sigma-like Sigma70_r4 HTH_23 HTH_IclR HTH_24 HTH_29 HTH_11 HTH_Crp_2 HTH_28 DUF2894 HTH_40 GerE HVO_A0261_N Xre-like-HTH TnsD HTH_38 HTH_10 LacI DUF3080 HTH_7 MarR
Other DBs
NCBI-ProteinID: AOZ10975
UniProt: A0A1D9IG25
LinkDB
Position
2:2713625..2714095
AA seq 156 aa
MRALYRDHHGWLKHWLRQRLGSAGDAADLAHDTFLRLLARDAAIVAREPRALLATVARGL
VANFYRRRQIEMAYLEALAAQPEATAPDPEARALALEALVEIDRRLDGLAPAVRRAFLLS
QLDGLGQAEIAAQLGVSLATVQRYLVKALHQCCFAP
NT seq 471 nt   +upstreamnt  +downstreamnt
atccgcgcgctgtaccgcgaccaccacggctggctcaagcactggctgcgacagcgcctg
ggcagcgccggcgatgccgccgacctcgcgcacgacaccttcctgcgcctgctcgcgcgc
gacgcggccatcgtggcgcgcgagccgcgcgcgctgctggccacggtggcacgcggcctg
gtggccaatttctaccggcgccgccagatcgagatggcctacctcgaagccctggcagcg
cagcccgaagccaccgcgcccgatcccgaggcgcgcgcgctggcgctggaagcgctggtc
gagatcgaccgccgcctcgacggcctggcgcccgcggtgcggcgcgccttcctgctgtcc
cagctcgacggcctggggcaggcggagatcgccgcgcaactgggggtctcgctggccacc
gtgcagcgctacctggtcaaggcgctgcaccagtgctgcttcgcgccctga

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