Cupriavidus malaysiensis: BKK80_31415
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Entry
BKK80_31415 CDS
T04978
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cup
Cupriavidus malaysiensis
Pathway
cup02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cup00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BKK80_31415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cup03021
]
BKK80_31415
Transcription machinery [BR:
cup03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKK80_31415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_23
HTH_IclR
HTH_24
HTH_29
HTH_11
HTH_Crp_2
HTH_28
DUF2894
HTH_40
GerE
HVO_A0261_N
Xre-like-HTH
TnsD
HTH_38
HTH_10
LacI
DUF3080
HTH_7
MarR
Motif
Other DBs
NCBI-ProteinID:
AOZ10975
UniProt:
A0A1D9IG25
LinkDB
All DBs
Position
2:2713625..2714095
Genome browser
AA seq
156 aa
AA seq
DB search
MRALYRDHHGWLKHWLRQRLGSAGDAADLAHDTFLRLLARDAAIVAREPRALLATVARGL
VANFYRRRQIEMAYLEALAAQPEATAPDPEARALALEALVEIDRRLDGLAPAVRRAFLLS
QLDGLGQAEIAAQLGVSLATVQRYLVKALHQCCFAP
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atccgcgcgctgtaccgcgaccaccacggctggctcaagcactggctgcgacagcgcctg
ggcagcgccggcgatgccgccgacctcgcgcacgacaccttcctgcgcctgctcgcgcgc
gacgcggccatcgtggcgcgcgagccgcgcgcgctgctggccacggtggcacgcggcctg
gtggccaatttctaccggcgccgccagatcgagatggcctacctcgaagccctggcagcg
cagcccgaagccaccgcgcccgatcccgaggcgcgcgcgctggcgctggaagcgctggtc
gagatcgaccgccgcctcgacggcctggcgcccgcggtgcggcgcgccttcctgctgtcc
cagctcgacggcctggggcaggcggagatcgccgcgcaactgggggtctcgctggccacc
gtgcagcgctacctggtcaaggcgctgcaccagtgctgcttcgcgccctga
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