Cupriavidus sp. Agwp_2: LPA45_00225
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Entry
LPA45_00225 CDS
T11307
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
cupa Cupriavidus sp. Agwp_2
Brite
KEGG Orthology (KO) [BR:
cupa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cupa03009
]
LPA45_00225 (dbpA)
Enzymes [BR:
cupa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LPA45_00225 (dbpA)
Ribosome biogenesis [BR:
cupa03009
]
Prokaryotic type
rRNA helicases
LPA45_00225 (dbpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XDA00060
LinkDB
All DBs
Position
56656..58077
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AA seq
473 aa
AA seq
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MNSTPVQAPPQPQAGPAFSTLPLSPAMLATLAQLGYDEMTPIQAASLPITLAGQDLVAQA
KTGSGKTAAFALALLNRLDPRRFDVQAMVLCPTRELADQVTQEIRRLARAEENIKVLALC
GGSPMRPQVDSLIHGAHIVVGTPGRILDHIDRGSLDLAAIGTLVLDEADRMLDMGFFDDI
AYIASRCPKERQTLLFSATYPEGIDKLAHKFLRKPQSLKLEATHDNATIRQRFYEVEEGE
RLGAVGRLLDHFRPASTLAFCNTKARCRELVELLRAQGYEALALHGDLEQRDRDQVLVQF
ANRSCSVLVATDVAARGLDIAQLEAVINVEITPDPEVHVHRIGRTGRADQEGWAFSLVSM
DEMGRVGNLEQHHGGEFEWHPLAELTPASSDRLLPPMVTLQMLGGRKEKIRPGDILGALT
GEAGFTKEQIGKINVLEMSTYIAVERSIGREAVKRLNAGKVKGKKVKVRLMTE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgacccctgtccaagcacccccccagccgcaagccggccccgctttttccacc
ctgccgctgtcgcccgccatgctcgccacgctggcgcaactcggctatgacgagatgacg
ccgatccaggcggccagcctgccgatcacgttggccggccaggacctggtcgcgcaggcc
aagaccggcagcggcaagaccgcggcgttcgcgctggcgctgttgaaccggctcgacccg
cgccgcttcgatgtgcaggccatggtgctgtgccccacgcgcgaactggccgaccaggtc
acgcaggaaatccgccgcctcgcgcgcgccgaagagaacatcaaggtgctggcgctgtgc
ggcggctccccgatgcgcccgcaggtggatagtcttattcacggcgcgcatattgtggtg
ggcacgccgggccgaattcttgatcatatcgatcgcggcagcctggacctggcggcaatc
ggcacgctggtgctcgacgaagccgaccgcatgctcgacatgggtttcttcgacgatatc
gcctacatcgccagccgttgcccgaaggaacgccagacgctgctgttctcggcgacctat
cccgagggcatcgacaagctcgcccacaaattcctgcgcaagccgcagtcgctgaagctg
gaagcgacgcacgacaacgccactatccgccagcgcttctatgaagtggaagaaggcgag
cgcctgggcgcggtcgggcggctgctcgatcatttccgcccggccagcacgctggcgttc
tgcaataccaaagcgcgctgccgcgaactggtggagctgctgcgcgcgcagggctacgag
gcgctggccctgcatggtgacctggagcagcgcgatcgcgaccaggtgctggtgcagttt
gccaaccgcagctgttcggtgctggttgccaccgacgtggccgcgcgcgggctggatatc
gcccagctggaagcagtgatcaatgtcgagatcacgcccgaccccgaggtgcacgtgcac
cgcattggccgtaccggccgcgccgaccaggagggctgggcgttcagcctggtcagcatg
gacgagatggggcgtgtaggtaacctggaacagcaccacggtggcgagttcgaatggcat
ccgctggccgagctgacgcccgcgagcagtgatcggctgctgccgccgatggtgacgctg
cagatgcttggcggccgcaaggagaagatccgccccggcgatatcctgggcgcgctgacc
ggcgaggctggctttaccaaggagcagatcggcaagatcaacgtgctggagatgtcgacc
tatatcgcggtggagcgcagcatcgggcgcgaggcggtgaagcggctgaatgcgggcaag
gtcaagggcaagaaggtgaaggtgcgtctgatgacggagtaa
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