Cupriavidus sp. Agwp_2: LPA45_05285
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Entry
LPA45_05285 CDS
T11307
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cupa Cupriavidus sp. Agwp_2
Pathway
cupa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cupa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPA45_05285 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cupa03400
]
LPA45_05285 (uvrB)
DNA repair and recombination proteins [BR:
cupa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPA45_05285 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LPA45_05285 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
AAA_16
FlaG
Motif
Other DBs
NCBI-ProteinID:
XDA00998
LinkDB
All DBs
Position
1137695..1139779
Genome browser
AA seq
694 aa
AA seq
DB search
MSNLAEAAPALDESKFVTFSGSPFQLYQPFAPAGDQPEAIRQLVEGVEDGLSYQTLLGVT
GSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVATVSAIYGIGNPNEYHQMILTL
RAGDKISQRDVIARLIAMQYTRNETDFQRGTFRVRGDTIDIFPAEHAEMAVRLEMFDDEV
ESLQFFDPLTGRVKQKIPRFTVYPSSHYVTPRETVLRAIEAIKDELRGRLEFFHKENRLV
EAQRLEQRTRFDLEMLSELGFCKGIENYSRHLSGARPGEPPPTLVDYLPSDALMFLDESH
VLIGQLNGMYNGDRARKTTLVEYGFRLPSALDNRPLKFDEFEGKMRQVMFVSATPAQFEQ
EHAGQVVEQVVRPTGLVDPTIIVRPATTQVDDLLSEIHARVEVNERVLVTTLTKRMAEQL
TEFLSENGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNVNGAAILYADRMTESMRKAISETERRRAKQMAFNEAN
GIIPRGVVKRIKDIIDGVYNASDAKAELQAAQEQARYEDMSEKQVSKEIKRLEKLMLDHA
RNLEFEQAAQVRDQLAKLKAQVFGASGEGALPPA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacctcgcagaagccgcgccggccctggacgaaagcaaattcgtcacattttcc
ggctccccgttccagctgtaccagccgttcgcgcccgccggcgaccagccggaagcgatc
cgccagctggtggaaggggtggaggacggcctgtcgtaccagacactgctgggcgtgacc
ggatcgggcaagaccttcaccatggccaacgtgatcgcccggatgggacggccggcgatc
gtgttcgcgcccaacaagacgctggcggcccagctctacgccgagttccgcgagtttttc
ccgcgcaatgcggtcgagtacttcgtcagctactacgactactaccagcctgaggcttac
gtcccgcagcgcgacctgttcatcgagaaagactcgtcgatcaacgagcatatcgagcag
atgcggctgtcggcgaccaagagcctgctggagcgccgcgacacggtgatcgtggcgacg
gtctcggcgatctatggtatcggcaacccgaacgaataccaccagatgattctcactttg
cgggccggcgacaagatcagccagcgcgatgtgatcgcgcgcctgatcgccatgcaatac
acccgcaacgagaccgatttccagcgcggcacgttccgcgtgcgcggcgacaccatcgac
atcttcccggccgaacacgccgagatggcggtgcggctggagatgttcgacgacgaagtg
gaatcgctccagttcttcgatccattgaccggccgcgtgaagcagaagatcccgcgcttc
acggtctacccgtcgagccactacgtgacgccgcgcgagaccgtgctgcgcgcgatcgag
gcgatcaaggacgaattgcgcggccggctggagttcttccacaaggaaaaccggctggtc
gaggcccagcggctggagcagcgtacccgcttcgatctcgaaatgctttcggagctgggc
ttttgcaagggcatcgagaactattcgcgccacctgtccggcgcgcgccccggggaaccg
ccgccgacgctggtcgactacctgccgtccgacgcgctgatgttcctggatgagtcgcac
gtgctgatcggccagctcaacggcatgtacaacggtgaccgcgcgcgcaagaccacgctg
gtcgagtacggcttccggctgccgtcggcgctggacaaccggccgctcaagttcgacgag
ttcgagggcaagatgcgccaggtaatgtttgtctcggcgacaccggcgcagttcgagcag
gagcatgccgggcaggtggtggagcaggtggtgcgcccgaccgggctggtcgacccgacc
atcatcgtgcgtccggcgaccacgcaggtggacgacctgctgtcggaaatccacgcgcgc
gtggaggtcaacgagcgtgtgctggtgaccacgctgaccaagcgcatggccgagcagctg
accgagttcctgtccgagaacggcgtcaaggtgcgctacctgcactcggacatcgacacg
gtggagcgcgtcgagatcatccgcgacctgcgcctgggtacctttgacgtgctggtcggc
atcaacctgctgcgcgagggtttggatatccccgaagtctcgctggtggcgatcctggat
gccgacaaggaaggcttcctgcgcgccgagcgctcgctgatccagaccatcggccgcgcc
gcgcgcaacgtcaatggcgccgccatcctgtatgccgaccgcatgaccgagtcgatgcgc
aaggccatcagcgagaccgagcgccgccgcgccaagcagatggccttcaacgaggccaac
ggcatcattccgcgcggcgtggtcaagcgcatcaaggacatcatcgacggcgtctacaac
gccagcgatgccaaggccgagctgcaggccgcgcaggagcaggcgcgctacgaggatatg
agcgaaaagcaggtgtctaaggaaatcaagcgcctggaaaaactcatgctcgaccatgcc
cgcaacctggaattcgagcaggcggcgcaggtgcgcgaccagttggccaagctcaaggcg
caggtgttcggcgccagcggcgagggcgcgctgccgcccgcctga
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