Cupriavidus sp. Agwp_2: LPA45_06155
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Entry
LPA45_06155 CDS
T11307
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cupa Cupriavidus sp. Agwp_2
Pathway
cupa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cupa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPA45_06155 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cupa03400
]
LPA45_06155 (xth)
Enzymes [BR:
cupa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LPA45_06155 (xth)
DNA repair and recombination proteins [BR:
cupa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LPA45_06155 (xth)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
XDA01159
LinkDB
All DBs
Position
complement(1310519..1311349)
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AA seq
276 aa
AA seq
DB search
MSAVALPTSGPLRIASWNVNSLKVRLPQVLQWLAEQDQAGAPIDALCLQELKLPDDKYPL
AELENAGFHSIYTGQKTYNGVAIVARDASMPGPADVVRNIPGFEDAQQRVIAATYGDLRL
VCAYFPNGQSPESEKFTYKLKWLEAMTAWLREEMQRHPRLALLGDFNIAPEDRDVHDPAK
WVGQNLVSPPERAAFTALVELGLADAFRRFEQPEKSFSWWDYRMMAFRRNAGLRIDHILL
SPALVEQCSACAIDRVPRTWEQPSDHTPVVATLHCG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggttgcactgcccaccagtggtccgctgcgcatcgccagctggaacgtcaac
tcgctcaaggtgcgcctgccgcaggtgctgcaatggctggccgagcaggaccaggccggc
gcgccgatcgacgcgctgtgcctgcaggaactgaagctgccggacgacaagtacccgctg
gccgaactggaaaatgccggcttccacagcatctacaccggccagaagacgtacaacggc
gtggccatcgtcgcccgcgacgccagcatgcccgggccggctgacgtggtgcgcaacatc
ccgggcttcgaggatgcgcagcagcgcgtgatcgccgccacctatggcgacctgcggctg
gtctgcgcctactttcccaacggccagtcgcccgagtcggaaaagttcacgtacaagctc
aagtggctggaagcgatgacagcgtggttgcgcgaggaaatgcagcgccatccgcgcctc
gcgctgctgggcgacttcaatatcgcgcccgaagaccgtgacgtgcacgacccggccaag
tgggtgggccagaacctcgtgtcgccgccggagcgcgccgccttcaccgcactggtggaa
ctgggcctggccgatgctttccgcaggttcgagcagccggagaagagcttctcctggtgg
gattaccgcatgatggcgttccgccgcaatgccgggctgcgcatcgaccatatcctgctg
tcgccggcgctggtggagcaatgctccgcctgcgcgatcgaccgcgtgccgcgcacctgg
gaacagccctcggatcacacgccggtggtcgccacgctgcactgcggctga
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