Cupriavidus sp. Agwp_2: LPA45_06505
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Entry
LPA45_06505 CDS
T11307
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cupa Cupriavidus sp. Agwp_2
Brite
KEGG Orthology (KO) [BR:
cupa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cupa03009
]
LPA45_06505 (rimO)
Enzymes [BR:
cupa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LPA45_06505 (rimO)
Ribosome biogenesis [BR:
cupa03009
]
Prokaryotic type
ribosomal protein modification factors
LPA45_06505 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XDA01225
LinkDB
All DBs
Position
1392019..1393398
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AA seq
459 aa
AA seq
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MKNPSESTTQKDHSPRVGFVSLGCPKALVDSEQIITQLRAEGYAISGTYDGADLVVVNTC
GFIDEAVQESLDAIGEALTENGKVIVTGCLGAKKDAAGHDIVSSVHPKVLAVTGPHALGE
VMQAVHTHLPKPHDPFTDLVPAAGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSR
PVAEVMLEAENLFKAGVKELLVISQDTSAYGVDVKYRTGFWNGRPLKTRMTELVAALGEL
AAQYGAWVRLHYVYPYPHVDEIIPLMSQGHVLPYLDVPLQHAHPDVLKRMKRPANAEKTM
DRIRAWREICPELTIRSTFIAGFPGETEAEFQTLLDFIAEAELDRVGCFAYSPVEGATAN
DLPGALPDEVREERRARFMEVAEEVSARRLQRKVGQTLRVLVDEVNQDGGIGRSSADAPE
IDGLVYIAPPERTSQRYRAGEFVDVKITGADGHDLWGEV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacccttcagaatcaacgacccagaaagaccatagtccgcgcgtgggattcgtt
tcgctcggctgtcccaaggccctggtcgactccgagcagatcattacccaactccgcgcc
gagggctatgccatcagcggcacctatgacggcgccgacctggtggtggtcaatacctgc
ggctttatcgacgaggccgtgcaggaaagcctggacgccatcggcgaggcgctgaccgag
aacggcaaggtcatcgtgactggctgccttggcgccaagaaggacgcggcgggacacgac
atcgtgtcttcagtgcatcccaaggtactggccgtgaccggcccgcatgcgcttggcgag
gtgatgcaggctgtgcacacgcacctgccgaagccgcacgacccgttcaccgacctggtg
ccggccgccggcatcaagctgacgcccaagcattacgcctacctgaagatttccgagggc
tgcaaccaccgctgctcgttctgcatcatcccgtcgatgcgtggcgacctggtctcgcgc
ccggtggcggaagtcatgctggaggccgagaacctgttcaaggccggcgtcaaggaacta
ctggtgatctcgcaggacaccagcgcctatggcgtcgacgtcaagtaccgcaccggcttc
tggaacggccgcccgctcaagacccgcatgaccgaactggtggcggcgctgggcgagctg
gccgcgcagtatggcgcctgggtgcgcctgcactatgtctacccatacccgcacgtcgac
gagatcatcccgctgatgtcgcagggccacgtgctgccgtacctggacgtgccgctgcag
cacgcccacccggacgtgctcaagcgcatgaagcgcccggccaacgccgaaaagaccatg
gatcgcatccgcgcatggcgcgagatctgccccgagctgaccatccgcagcacctttatc
gccggcttcccgggcgagaccgaggccgagttccagacgctgctggactttatcgccgag
gcggagctggaccgtgtcggctgctttgcgtactcgccggtggaaggtgccaccgccaac
gacctgccgggcgcgctgcccgacgaggtgcgcgaggagcgccgcgcgcgcttcatggaa
gtggccgaggaagtgtccgcgcgccgcctgcagcgcaaggtcggccagaccctgcgcgtg
ctggtcgacgaggtcaaccaggacggcggcatcggccgttcctcggcggatgcgccggaa
atcgacggcctggtctatatcgcgccgccggagcgtacttcgcagcgctaccgcgcgggc
gagtttgtcgacgtgaagatcaccggcgccgacggccacgacctgtggggcgaggtctga
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