Cupriavidus sp. Agwp_2: LPA45_10995
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Entry
LPA45_10995 CDS
T11307
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cupa Cupriavidus sp. Agwp_2
Pathway
cupa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cupa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPA45_10995 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cupa03021
]
LPA45_10995 (rho)
03019 Messenger RNA biogenesis [BR:
cupa03019
]
LPA45_10995 (rho)
Transcription machinery [BR:
cupa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LPA45_10995 (rho)
Messenger RNA biogenesis [BR:
cupa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LPA45_10995 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
XCZ98771
LinkDB
All DBs
Position
2347583..2348845
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AA seq
420 aa
AA seq
DB search
MHLTELKSLHVSALLEMAATLEIDNAQRMRKQELMFAILKKRAKMGETIFGDGTLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GQPPEAVKNRIMFENLTPLHPNRPLTLERDIKAEENITGRIIDMIAPIGRGQRALLVASP
KSGKTVMLQHIAHAIANNHPEADLFVLLIDERPEEVTEMQRSVRGEVVASTFDEPAIRHV
QVAEMVIEKAKRLVELKRDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREELLIKPEILQKIWVLRKFISDMDEVQAMEFIMDKMKATKNNAEFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgacagaactcaaatcgcttcacgtgtctgcgcttctcgaaatggcggcaacg
ctcgagatcgacaacgcacagcggatgcgcaaacaagaactgatgtttgcgatcctgaag
aagcgcgccaagatgggcgaaaccatcttcggagacggcacgctggaagttctgcccgac
ggcttcggcttcctgcgctcgccggagacttcgtacctggccagcacggacgatatctat
atcagcccgtcgcagatccgccgcttcaacctgcataccggcgattcgatcgaaggcgag
gtacgcacgcccaaggacggcgagcgctactttgcgctggtgaaggtggacaaggtcaac
gggcagccgcccgaagcggtcaagaaccgcatcatgttcgagaacctgacgccgctgcac
ccgaaccggccgctcacgctcgaacgcgacatcaaggctgaagagaacatcaccggccgc
atcatcgacatgatcgcgccgatcggccgcggccagcgcgcgctgctggtggcatcgccc
aagtccggcaagaccgtgatgctgcaacacattgcgcacgcgattgccaacaatcatccg
gaagccgacctgttcgtgctgctgatcgatgagcgcccggaagaagtgaccgagatgcag
cgctcggtgcgcggcgaagtcgtggcatcaaccttcgacgaaccggccatccgccacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgcctggtcgaactgaagcgcgacgtg
gtgatcctgctggactcgatcacccgcctggcgcgcgcctacaacacggtggtgccggcc
tcgggcaaggtgctgacgggtggtgtcgacgccaacgcgctgcagcgcccgaagcgtttc
ttcggtgccgcgcgcaacctggaagaaggcggttcgctgaccatcatcgccaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctatgaagagttcaagggcaccggcaac
atggaagtgcacctggaacgccgcctggcggaaaagcgcgtctacccgtcgatcaacctg
aacaagtcgggcacgcgccgcgaagaactgctgatcaagccggaaatcctgcagaagatc
tgggtgctgcgcaagttcatctccgacatggacgaagtgcaggcgatggaattcatcatg
gacaagatgaaggccacgaagaacaacgcagagtttttcgatatgatgcgcagaggcggc
taa
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