Cupriavidus sp. Agwp_2: LPA45_12125
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Entry
LPA45_12125 CDS
T11307
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
cupa Cupriavidus sp. Agwp_2
Pathway
cupa00020
Citrate cycle (TCA cycle)
cupa00190
Oxidative phosphorylation
cupa00650
Butanoate metabolism
cupa00720
Other carbon fixation pathways
cupa01100
Metabolic pathways
cupa01110
Biosynthesis of secondary metabolites
cupa01120
Microbial metabolism in diverse environments
cupa01200
Carbon metabolism
Module
cupa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cupa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cupa_M00149
Succinate dehydrogenase, prokaryotes
cupa_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
cupa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LPA45_12125 (sdhA)
00650 Butanoate metabolism
LPA45_12125 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LPA45_12125 (sdhA)
00720 Other carbon fixation pathways
LPA45_12125 (sdhA)
Enzymes [BR:
cupa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LPA45_12125 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
FAD_binding_3
HI0933_like
GIDA
Thi4
NAD_binding_7
Lycopene_cycl
Pyr_redox_3
FAD_oxidored
ThiF
Motif
Other DBs
NCBI-ProteinID:
XCZ98971
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Position
complement(2574714..2576492)
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AA seq
592 aa
AA seq
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MVAVKTGLPRRRFDVVIVGAGGAGMRASLQLAEAGLNVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHALLHTLYQRNVRAKTHFFVEWMALDLIRDQDG
DVLGVTALEMETGEVYILEAKTTLFATGGAGRIYAASTNAFINTGDGLGMAARAGVPLED
MEFWQFHPTGVAGAGVLITEGVRGEGGILRNKDGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNGDYVLLDLTHVGAETIMKRLPSIREIGMKFANVDAIKEPIPVVPTIHYQ
MGGIPTNYHGQVVVPKNGNPNEVLNGFYAIGECSCVSVHGANRLGTNSLLDLVVFGRAAG
NHIIAQNLKQKEHKPLPADAADLALSRLAKLQATSSGEYTQDVANDIRKNMQSHAGVFRT
QKLMDEGVERILEVSERANDIHLKDKSKVFNTALVEALEVANLVEVAKATMISAAARKES
RGAHAHSDFPNRDDQNWLKHTLFYSEGNRLDYKPVKMEPLTVESVPPKARTF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagtcaagactggattgccgcgtcgccgctttgacgtggtcatcgtcggtgct
ggcggcgccgggatgcgcgcatccctccagctcgcggaagccggcctgaacgtggccgtg
ctgtccaaggtgtttccgacccgctcgcacaccgtggcggcgcagggcggcatcggtgcc
tcgctgggcaacatgagcgaagacaactggcactatcacttctacgacaccatcaagggc
tcggactggctgggtgaccaggacgccatcgagttcatgtgccgtgaagccccgaaggtc
gtgtacgagctcgaacacttcggcatgccgttcgaccgcaaccccgacggcaccatctac
cagcgcccgttcggcggccacaccgccaactacggcgagaagccggtgcagcgcgcctgc
gccgcggctgaccgtaccggccacgcgctgctgcacacgctgtaccagcgcaacgtgcgc
gccaagacccacttcttcgtcgagtggatggcgctggacctgatccgcgaccaggacggc
gacgtgctgggcgtgaccgcgctggaaatggaaaccggcgaggtctacatcctcgaagcc
aagaccacgctgttcgcgaccggcggtgccggccgtatctacgccgcttccaccaacgcc
ttcatcaacaccggtgatggcctgggcatggccgcacgcgctggcgtgccgctggaagac
atggagttctggcagttccacccgaccggcgtggccggcgcgggcgtgctgatcaccgaa
ggcgtgcgcggcgaaggcggtatcctgcgcaacaaggacggcgaacgcttcatggagcgc
tatgccccgacgctgaaggacctggcgccgcgtgacttcgtctcgcgctcgatggaccag
gaaatcaaggaaggccgcggctgcggcccgaacggcgactacgtgctgctcgacctgacc
cacgtcggtgccgagaccatcatgaagcgactgccgtcgatccgcgaaatcggcatgaag
ttcgccaacgtcgacgcgatcaaggaaccgatccccgtggtcccgaccatccactaccag
atgggcggtatcccgacgaactatcacggccaggtcgtggtgccgaagaacggcaacccg
aacgaagtcctgaacggtttctatgcgatcggcgaatgctcgtgcgtgtcggtgcacggc
gccaaccgcctgggcaccaactcgctgctcgacctggtggtgttcggccgtgccgccggc
aaccacatcatcgcgcagaacctgaagcagaaggaacacaagccgctgccggccgatgcc
gccgacctcgcgctgtcgcgcctggccaagctgcaggccacgtcgtcgggcgagtacacg
caggacgtcgccaacgacatccgcaagaacatgcagtcgcatgccggcgtgttccgtacg
cagaagctgatggacgaaggcgtcgagcgcatcctggaagtgtccgagcgcgccaacgac
atccacctgaaggacaagtccaaggtcttcaacaccgcgctggtggaagccctggaagtg
gccaacctggtggaagtggccaaggccaccatgatctcggcggcggcccgcaaggaatcg
cgcggtgcccacgcgcacagcgacttcccgaaccgcgacgaccagaactggctcaagcac
acgctgttctacagcgaaggcaaccgcctcgactacaagccggtgaagatggaaccgctg
acggtggaaagcgtgccgccgaaggcccgtaccttctga
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