Cupriavidus sp. Agwp_2: LPA45_14690
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Entry
LPA45_14690 CDS
T11307
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cupa Cupriavidus sp. Agwp_2
Brite
KEGG Orthology (KO) [BR:
cupa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cupa03016
]
LPA45_14690
Enzymes [BR:
cupa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LPA45_14690
Transfer RNA biogenesis [BR:
cupa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LPA45_14690
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCZ99451
LinkDB
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Position
complement(3142151..3144265)
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AA seq
704 aa
AA seq
DB search
MQLLFEEGGEIRAGTVLNQQGEAYQVELPAGKRTKVKSRDVLLQFAQPSAIELVRQTGDM
VSEIDLDFLWECAPEAEFGFAELAAEYYGAEPGAVQQAALAMALHGNPVYFRRKGRGRYQ
RAPEDQLKAALAALERKRQQALVQAEYEDQLKALTLPESFRNKVLQLLFKPDKNSLEYKA
MDAACTALGMSPMRLMVAAGGVASARALHEAKFLAECFPKGTGFPDTDVPEPSADLPLAE
VEAFSIDDVTTTEIDDALSVTKLPDGKLRIGIHIAAPALGIRRGEPLDVIARQRLSTVYF
PGDKITMLPDPVVERYTLQEGRVCPALSLYVTVDPTVWLITGSETRAEMVPIAANLRHNL
LDDVITEASLADGSGDYPFREALTQLWHFAGYLYDERQKARLASGLRPETHNRADFNFYL
DDQPDGSQRVRIEQRKRGSPLDKIVAELMILANSTWGKLLADNGVPGIYRTQKAWGMHRT
RMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQILAVAQHGVTAKLVAPFKPKDADLL
AAVADFEGTYAAYADHQSTMERYWCLRWLKQENRERLVAAVLKEGAVRFTEIPLVTRVPE
LVQAQRGTQVLLEIGETDEITLEVSCRVLEIFAGEGVLPEEELESDEEAAEVSAEAAAEA
AAEDAAEQAAQQAAGVSDEAAADAGGDAPAQPSAERDTGGTAAG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgttcgaagaaggcggcgagatccgcgccggcaccgtgctgaaccagcag
ggcgaggcttaccaggtggagctgccggccggcaagcgcaccaaggtcaagtcgcgcgac
gtgctgctgcagtttgcgcagccgtcggcaatcgagctggtccgccagaccggcgacatg
gtttccgagatcgacctggacttcctgtgggaatgtgcccctgaggccgagttcggcttc
gccgagctggccgccgagtactacggcgccgagcccggcgcggtgcagcaggcggcgctt
gcgatggcgctgcacggcaacccggtgtacttccgccgcaaggggcgtggccgctaccag
cgcgcgcccgaggaccagctcaaggccgcgctggccgcgctcgagcgcaagcgccagcag
gcattggtgcaggccgaatatgaagaccagctcaaggcgctgacgctgccggaatcgttc
cgcaacaaggtgctgcagctgctgttcaagccggacaagaacagcctggaatacaaggcc
atggacgcggcctgcaccgcgctcggcatgtcgccgatgcggctgatggtggccgccggc
ggcgtcgccagcgcgcgtgcgctgcacgaggccaagttcctcgccgagtgcttccccaag
ggcaccggctttcccgataccgacgtgcccgagccgtccgccgacctgccgctggccgag
gtcgaggcgttctcgatcgacgacgtcaccaccaccgagatcgacgatgcgctgtcggtg
acgaagctgcccgacggcaagctgcgcatcggcatccatatcgccgcgcccgcgctcggc
atccgccgcggcgagccgctcgacgtgatcgcacgccagcgcctgtcaacggtgtacttc
ccgggcgacaagatcaccatgctgcctgacccggtggtagagcgctatacgctgcaggaa
ggccgggtgtgcccggcgctgtcgctgtacgtgacggtggacccgacggtgtggctgatc
accggcagcgagacccgcgccgagatggtgccgattgccgccaacctgcgccataacctg
cttgacgacgtcatcaccgaagcctcgctcgccgacggcagcggcgactacccgttccgc
gaggcgctgacccagctgtggcatttcgccggctacctctacgacgagcgccagaaggcg
cgcctggccagcggcctgcgcccggagacgcacaaccgcgccgacttcaacttctacctc
gacgaccagcccgacggcagccagcgcgtgcgcatcgagcagcgcaagcgtgggtcgccg
ctggacaagatcgtggccgagctgatgatcctggccaacagcacgtggggcaagctgctg
gcggacaacggcgtgcccggcatctaccgcacgcagaaggcgtggggcatgcatcgcacc
cgcatgcagacctacccggcaccgcatgaaggtttgggggtagcccagtacgcgtggagc
acctcgccgctgcgccgctacgtcgacctggtcaaccagtggcagatcctggcggtggcg
cagcatggcgtgaccgccaagctggtggcgccgttcaagcccaaggacgccgacctgctg
gcagccgtggcagacttcgaaggcacttatgccgcctatgccgaccaccagtcgaccatg
gagcgctactggtgcctgcgctggctcaagcaggagaaccgcgagcgcctggtcgccgcg
gtgctcaaggaaggcgcggtgcgctttaccgagatcccgctggtcacgcgcgtgcccgaa
ctggttcaggcgcagcgtggcacccaggtgctgctggagatcggcgagaccgacgagatc
acgctggaagtctcctgccgcgtgctggagatctttgcgggcgagggcgtgttgcctgaa
gaagagctggaaagcgacgaagaagccgctgaagtgtcggccgaagccgctgccgaggcc
gccgcggaagacgccgcagagcaggccgcccagcaggccgcaggggtctcggacgaggcc
gccgcagacgccggtggcgacgcgccggcgcagccgtcggctgagcgcgacaccggcggc
accgccgccggctga
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