Cupriavidus sp. Agwp_2: LPA45_15150
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Entry
LPA45_15150 CDS
T11307
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
cupa Cupriavidus sp. Agwp_2
Pathway
cupa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cupa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPA45_15150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cupa03019
]
LPA45_15150
Messenger RNA biogenesis [BR:
cupa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LPA45_15150
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
XCZ99538
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All DBs
Position
3237242..3237904
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AA seq
220 aa
AA seq
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MLDREGFRPNVGIILLNARNEVFWGKRIGEHSWQFPQGGIKYGETPEQAMYRELHEETGL
LPEHVRIVGRTRDWLRYEVPDKFIRREIRGHYRGQKQIWFLLRMAGRDCDIHLRATDHPE
FDAWRWSHYWVPLDAVIEFKRDVYQMALTELSRFLNRHPRVPLSPYGTHAHGRHGGVHRG
IPPVVAGQPANTAGAEVGNAAAQETVSPAAPVTNSRSTDD
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcgtgaaggctttcgcccgaacgtcggcatcatcctcctcaacgcacgcaac
gaggttttctggggcaagcgaatcggcgaacactcctggcagtttccgcagggtggcatc
aagtacggcgagacgccggaacaggccatgtaccgcgaactgcatgaggaaaccggcctg
cttccggagcacgtcaggatcgtaggtcgcacacgcgactggctgcgttacgaggtgccg
gacaagttcatccgccgcgaaatccgcggccattacaggggccagaaacaaatctggttc
ctgctccgcatggcgggcagggactgcgacattcatcttcgggcaaccgaccatccggag
ttcgacgcctggcgctggagccactactgggtgccgctggatgcggtgatcgagttcaag
cgcgatgtctaccagatggcgctgacggagttgtcgcgcttcctgaaccggcatccgcgc
gtgccgctcagcccctatggcacgcatgcgcacggccgccatggcggcgtacatcgcggc
attccacccgtggtcgccggccagccggcaaatactgccggtgccgaagtcggcaacgcg
gcagcgcaagagactgtttcgccggctgcgccggttaccaactcacggagtactgatgac
tag
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