Cupriavidus sp. Agwp_2: LPA45_28990
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Entry
LPA45_28990 CDS
T11307
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cupa Cupriavidus sp. Agwp_2
Brite
KEGG Orthology (KO) [BR:
cupa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cupa03000
]
LPA45_28990
Transcription factors [BR:
cupa03000
]
Prokaryotic type
Helix-turn-helix
Other families
LPA45_28990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
GAF
HTH_30
AAA_5
HTH_23
HTH_28
HTH_22
HTH_29
HTH_Tnp_ISL3
Mg_chelatase
HTH_50
HTH_psq
HTH_1
HTH_17
Phage-MuB_C
HTH_7
NUMOD1
HTH_11
HTH_20
HTH_Tnp_1
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
XDA02731
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Position
pCCF_large:2488069..2490039
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AA seq
656 aa
AA seq
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MHRAAHPAADPALSGVQRHGADADDTDRAGLIARAHARSAGFGLDVCHAPGYDALGARAL
VELVDASRDLYRHALPVMETLHAQIANTDSMVLLTDSSGVILHSLGDGEFVARARRVALA
PGVSWSEPSKGTNAIGTALAEARPTIVHAAEHFLQANHQLTCSCAPIAGPTGEILGALDV
SGDHRGFHRHTMALVRMSAQMIENHLFANHFPEAVLVRFHARPEFVGTLFEGMAAFTPDG
AFLAANRSGLFQLGLAPQSLALSGFAELFGQPVRMAMQARAAGTLHVLTLPSRVQVFARI
EYRAAPVSVRQPLAEEPLPPALAALDTGDAAVAAVLRRVRKVSGRDIPILVQGRTGAGKE
WLARAIHAASPRANGPFVAVNCAAIPETLIEAELFGYEEGAFTGARRRGSAGKLAQAHGG
TLFLDEIGDMPLAQQVRLMRVLQERAVTPLGAAHAVPVDVRVVCATHRDLRAMIADGTFR
EDLYYRINALVVTLPALRERSDLPVLVERILQRQQEEAGPESPVKVSAQVLALLCIHPWP
GNIRQLANVLRTAAILAEGEAEIGCEHLPEGFEQECGEGVGCRAAAAAPTPASDASSSAP
SAPSAAARIRDCEAALIRQALERHGGNVSHAARELGVSRNTIYRRLKEGTDDEPGA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgtgccgcccatcccgcagcagacccagcgctttccggcgtccagcgccacggc
gcagacgctgacgacaccgaccgcgccggactgatcgcgcgcgcgcatgcgcgctccgcc
ggcttcggcctggatgtctgccacgcgccgggctacgacgccctcggcgcgcgcgcactg
gtcgagctcgtcgatgccagccgcgacctgtaccgccacgcgctgccggtgatggaaacc
ctgcacgcgcagatcgccaataccgacagcatggtgctgctgaccgacagcagcggcgtg
atcctgcacagcctgggcgacggcgagttcgtcgcgcgcgcccgccgcgtggcgctggcg
ccgggcgtgtcgtggtccgagcccagcaagggcaccaacgccatcggcacagcattggcc
gaggcgcgtcccaccatcgtccacgccgccgagcacttcctgcaggccaaccaccagctc
acctgctcgtgcgcgccgattgccggtcccaccggcgagatcctgggcgcgctcgacgtc
agcggcgaccatcgcggcttccatcgccacaccatggcgctggtgcggatgtcggcgcag
atgatcgagaaccacctgttcgccaaccatttccccgaggccgtgctggtgcgcttccat
gcgcggccggaattcgtcggcacgctgtttgaagggatggcggcgttcacgcccgacgga
gccttccttgccgccaaccgcagcggcctgttccagctggggctggcgccgcagtcactg
gcactgtccgggtttgccgagctgttcggccagccggtgcgcatggccatgcaggcgcgt
gcggccggaacgctgcacgtgctgacgttgcccagccgtgtgcaggtgttcgcccgcatc
gaataccgcgcggcgccggtcagcgtgcgccagccgctggcggaggagccgctgccgccc
gcgctggccgcgctcgacaccggcgacgccgccgtggcggccgtgctgcgccgcgtgcgc
aaggtcagcggccgcgatatcccgatcctggtccagggccgcaccggcgccggcaaggag
tggctggcgcgcgccatccacgccgcctcgccgcgcgccaatggcccctttgtcgccgtc
aattgcgcggcgattcccgaaaccctgatcgaggccgagctgttcggctatgaagaaggt
gcctttaccggcgcgcgccgccgcggcagcgccggcaagctggcacaggcgcacggcggc
acgctgttcctcgatgaaatcggcgacatgccgctggcgcagcaggtgcggctgatgcgc
gtgctgcaggagcgcgcggtgacgccgctgggcgcggcgcacgcggtgccggtcgatgtg
cgcgtggtctgcgccacccaccgcgacctgcgcgccatgatcgcggatggcactttccgt
gaagacctgtactaccgcatcaatgcgcttgtggtgacgctgccggcgctgcgcgagcgc
agcgacctgccggtgctggtggagcggatcctgcagcggcagcaggaagaggcggggccg
gaatcaccggtgaaggtgagtgcgcaagtgctggcgttgctgtgcatccatccgtggccc
ggcaatatccgccagcttgccaacgtgttgcgcacggcggcgatactggccgagggcgag
gcggagatcgggtgcgagcacctgccggaagggttcgagcaggaatgtggggaaggcgtt
ggttgcagagccgctgccgcggcccccacgccagcgagcgacgcctcgtcctccgctccc
tccgctccctcggcggccgcgcgtatccgcgactgcgaagcggcgttgatccgccaggcg
ctggagcgccatggcggcaatgtcagccacgctgcccgcgaactcggggtatcgcgcaat
acgatctaccggcgactgaaggaaggcacggacgacgagccgggcgcatag
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