Cupriavidus sp. DF5525: ABNX08_016170
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Entry
ABNX08_016170 CDS
T11801
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cupd Cupriavidus sp. DF5525
Pathway
cupd03420
Nucleotide excision repair
cupd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cupd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABNX08_016170
03430 Mismatch repair
ABNX08_016170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cupd03400
]
ABNX08_016170
Enzymes [BR:
cupd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABNX08_016170
DNA repair and recombination proteins [BR:
cupd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABNX08_016170
MMR (mismatch excision repair)
Other MMR factors
ABNX08_016170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
XGJ17023
LinkDB
All DBs
Position
1:complement(3470461..3472809)
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AA seq
782 aa
AA seq
DB search
MSDLLANLNAEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQNGHVSPAGILAVTF
TNKAAKEMQTRLSAMLPINTRGMWIGTFHGLCNRLLRAHFRDAGLPQTFAILDSQDQLSA
IKRLLKSLNVDDEKYPAKNLQYFINNAKEQGLRPADVEANDDFNKRFVDLYAAYDTQCQR
EGVVDFAELLLRCYELLRYNDAIRQHYQHRFRHVLVDEFQDTNVLQYQWLKLLAGHGTQN
PAAVFAVGDDDQSIYAFRGANVGNMRDFEHEFRVRRMIKLEQNYRSHGHILDSANHLISH
NARRLGKNLRTDAGHGELVRVFHGGSDGQEAAWIIDEIRDQIAQGASRAEIAILYRSNAQ
SRVIEHALFSAGIPYRVYGGLRFFERAEIKHALAYMQLLENPRNDAAFGRVVNFPARGIG
ARSLEVLQDMARQYDCALAEAVAYVPGAAGSKLAAFTRLIERMRDETRRMTLAETVEYVI
NTSGLITHYQGEKEGQDRIENLQELVTAAQAFVVEEGYGLDALAAAIPVDRAAPTPALAE
GDQSQQVLDPEALPVVMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKGLEFDVVF
ITGLEEGLFPHENSMMDPDGLEEERRLMYVAITRARQRLFLSFAQSRMLHGQTRYHVRSR
FFEELPEASLKWLTPPAQSYGGVRKQERDSAWGKDWYRKPEDVPYTGTRPTGGMDNGNGY
ADAKREAGTGFRVGQSVFHNKFGEGVITALEGEGADARANIKFKRHGAKWLALSVAKLDA
ID
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgcttgccaacctgaacgccgaacaactagccgccgtgaccctgcctgac
gagccggcgctgatcctggcgggtgcgggcagcggcaagacccgcgtgctgaccacgcgc
atcgcctggctgatccagaacgggcatgtctcgccggccggcatcctggcggtgaccttt
accaacaaggccgctaaggaaatgcagacgcggctgtcggcgatgctgccgatcaacacc
cgcggcatgtggatcggcaccttccacggcctgtgcaaccgcttgctgcgcgcgcatttt
cgcgatgccggcctgccgcagacctttgccatcctggacagccaggaccagctctcggcg
ataaagcggctcttgaagtcgctcaacgtcgacgacgagaagtacccggccaagaacctg
cagtacttcatcaacaacgccaaggagcagggcctgcgcccggccgatgtcgaggccaac
gacgacttcaacaagcgcttcgtcgacctctacgccgcctacgacacgcagtgccagcgc
gagggcgtggtcgactttgccgagctgctgctgcgctgctacgagctgctgcgctacaac
gacgcgatccgccagcactaccagcaccgcttccgccatgtgctggtcgacgagttccag
gacaccaacgtgctgcagtaccagtggctcaagctgctggccggccatggcacgcagaac
cccgccgcggtctttgcggtgggcgacgacgaccagagcatctacgccttccgcggtgcc
aacgtcggcaatatgcgcgacttcgagcatgagttccgtgtgcgcaggatgatcaagctg
gagcagaactaccgctcgcacgggcatatcctggattcggccaaccacctgatttcgcac
aacgcgcgccgcctgggcaagaacctgcgcaccgacgccggccatggcgagctggtgcgg
gtgttccatggcggctcggacggccaggaggccgcctggatcatcgacgaaatccgtgac
cagatcgcgcagggcgccagccgcgccgagattgcgatcctgtaccgcagcaacgcgcag
tcgcgcgtgatcgagcatgcgctgttctccgcgggcatcccataccgcgtgtacggcggc
ctgcgcttcttcgagcgcgccgagatcaagcacgcgctggcttacatgcagctgctggag
aatccgcgcaacgatgccgcctttggccgcgtggtcaatttcccggcgcgcggcatcggc
gcgcgctcgcttgaagtgctgcaggacatggcgcgccagtacgactgcgcgctggccgag
gcggtggcctacgtgcccggcgccgccggcagcaagctagcggcgttcacgcggctgatc
gagcggatgcgcgacgagacccggcgcatgacgctggcggaaaccgtcgagtacgtgatc
aacaccagcggcctgatcacccactaccagggcgagaaggagggccaggaccgtatcgag
aacttgcaggaactggtgaccgcggcgcaggccttcgtggtcgaggagggctacgggctg
gatgcgctggccgccgcgatcccggtggaccgcgccgcgccgactccggcgctggccgaa
ggcgaccagtcgcaacaggtgctggatcccgaggcgctgccggtggtgatgacgccgctg
gtcgcgttcctgacgcatgcctcgctggaggccggcgacaaccaggcccaggccggccag
gacgcggtgcagatgatgaccgtgcacgcggccaaggggctggagttcgacgtggtcttt
atcaccgggctggaggaaggactgttcccgcacgagaacagcatgatggacccggacggc
ctggaggaagaacggcggctgatgtacgtggcaatcacgcgcgcgcgccagcgactgttc
ctgtcgttcgcgcaaagccgcatgctgcacggccagacgcgctaccacgtgcgctcgcgc
ttcttcgaggaactgcccgaggcctcgctcaaatggctcacgccgccggcgcagagctac
ggcggcgtgcgcaagcaggaacgggacagcgcgtggggcaaggactggtaccgcaagccc
gaagacgtgccctacaccggcacgcgcccgaccggcggcatggacaacggcaacgggtat
gccgatgccaagcgcgaggccggcaccggcttccgcgtgggtcagtcggtgttccacaac
aagttcggcgaaggcgtgatcaccgcgctggagggcgagggcgccgatgcgcgcgccaat
atcaagttcaagcgccacggcgccaagtggctggcgctgtcggtggcgaagctggacgcg
atcgactga
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