Cupriavidus sp. DF5525: ABNX08_018665
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Entry
ABNX08_018665 CDS
T11801
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cupd Cupriavidus sp. DF5525
Pathway
cupd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cupd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABNX08_018665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cupd02022
]
ABNX08_018665
02035 Bacterial motility proteins [BR:
cupd02035
]
ABNX08_018665
Two-component system [BR:
cupd02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
ABNX08_018665
Bacterial motility proteins [BR:
cupd02035
]
Pilus system
Twitching motility proteins
ABNX08_018665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
FleQ
Imm5
Motif
Other DBs
NCBI-ProteinID:
XGJ17488
LinkDB
All DBs
Position
1:complement(3997153..3998793)
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AA seq
546 aa
AA seq
DB search
MPPRMSSAPDPILVIDDEADLRELLDISIRRMGHDVVLAGSLAEAREKLAQRRYSLVLTD
MRLGDGLGIEIVRQLSAAPERVPVAVITAYGSADNAVEALKAGAFDYIAKPVSLEQLRSL
VLNALGRQQRDSDAAAADPAADRAAALLPGHSAAMQEVRRSLSRLARSMAPVVISGESGS
GKERAARAIHATSARAAHPFVAVNCGAIPENLMESEFFGYVKGAFTGADGERGGFFQAAN
GGTLMLDEVADLPLPMQVKLLRALQERRVRKIGASREDAVDVRVMCASHKDLAAMVAAGQ
FRQDLYYRLNVLELRMPTLRERGEDIPVLARAILDHLAVRYGDPRPKRLAPAALDRLAAY
RFPGNVRELENLLERAYAFAESEQIEVADLGPLEAGAERAGLMHAPAPAMAPAAHYAPWA
AGGMWPPVPPTAVPSTAPTSAPEPAPPAPAAAAPEPETDGDPVDRACRGIVFPIDLAARL
EAVERELILQALAQTNFNRTAAAPLLGLNLRQLRYRIQQLGIREAMDAADRGAAEGAGEN
ATEGTS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgccaccccgaatgtccagcgcgcccgatcccatcctcgtcatcgacgacgaggccgac
ctgcgcgagctgctggatatctcgatccgccgcatgggacatgacgtggtgctggccggc
tcgctggccgaggcgcgcgagaagctggcgcagcgccgctacagcctggtgctgactgac
atgcggctgggcgacggactcggcatcgagatcgtgcggcagctttccgccgcgcccgag
cgcgtgccggtcgcggtcatcaccgcctacggcagcgccgacaacgccgtggaggccctc
aaggccggcgccttcgactacatcgccaagccggtatcgctggaacagctgcgcagcctg
gtgctgaacgcgctcggccgccagcagcgcgacagcgatgccgccgcggccgacccagcc
gccgaccgcgccgcggccttgctgcccggccactccgccgccatgcaggaggtgcgccgc
tcgctgtcgcggctggcgcgcagcatggcaccggtggtgatcagcggcgaatccggcagc
ggcaaggagcgcgccgcccgcgccatccatgcgaccagcgcccgcgccgcgcaccccttt
gtcgcggtcaactgcggcgccatccccgagaacctgatggagtccgagttcttcggctac
gtcaaaggggcgttcaccggcgccgacggcgagcgcggcggcttcttccaggccgccaac
ggcggcacgctgatgctcgacgaagtggccgacctgccgctgccgatgcaggtcaagctg
ctgcgcgcgctgcaggagcggcgcgtgcgcaagatcggcgccagccgtgaagacgccgtg
gacgtgcgcgtgatgtgcgccagccacaaggatctggcggcgatggtcgcggccggccag
ttccggcaggacttgtattaccgcctgaacgtgctggagctgcgcatgcccaccctgcgc
gagcgcggcgaggacatcccggtgctggcgcgcgccatcctggaccacctggcggtgcgc
tacggcgacccgcgccccaagcggctggcgccggcggcgctggaccggctggccgcctac
cgcttccccggcaacgtgcgcgaactggagaacctgctcgagcgcgcctacgcctttgcc
gagagcgagcagatcgaggtcgccgacctgggcccgctggaagcaggcgccgagcgcgcc
gggctgatgcacgcgccggcccccgccatggcgcccgccgcccactacgccccctgggcc
gccgggggcatgtggccgcccgtgccgcctacggcggtcccatcgacggccccgacatcg
gcaccggaacccgcaccgcctgccccggccgccgccgccccggaacccgaaaccgacggc
gatccggtggatcgcgcctgccgcggcatcgtcttcccgatcgacctggcggcgcggctg
gaagccgtggagcgcgagctgatcctgcaggcgctggcacaaaccaacttcaaccgcacc
gcggcggcgccgctgctgggcctgaacctgcgccagctgcgctaccgcatccagcagctg
ggcatccgcgaggccatggacgccgccgaccgcggcgccgccgagggagcgggcgagaac
gctaccgagggcacgtcatga
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