Cupriavidus sp. DF5525: ABNX08_019115
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Entry
ABNX08_019115 CDS
T11801
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cupd Cupriavidus sp. DF5525
Pathway
cupd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cupd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABNX08_019115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cupd03400
]
ABNX08_019115
Enzymes [BR:
cupd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABNX08_019115
DNA repair and recombination proteins [BR:
cupd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABNX08_019115
Prokaryotic type
ABNX08_019115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XGJ17569
LinkDB
All DBs
Position
1:4097123..4097896
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AA seq
257 aa
AA seq
DB search
MQADLFATDTHAPGEPAPTASLQAQADALPAAWRALLDPCIQVPAWLELAAFVDGERAAG
KPVFPHHVFHALHLTPPDAVKVVILGQDPYHGTGSVGGVEMPQAHGLAFSVPEGIKVPPS
LRNIFKEIAAEFGADGNGPPRTSGNLEGWARQGVLLLNTVLTVEQGQAASHARRGWEAVT
DCLIQHLAASRPNLVFMLWGSHAQAKKPLLGDGHCVLEAPHPSPLSAHRGFLGCGHFREA
NCWLEAHGRAPVEWTVA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgatctcttcgccaccgacacccacgcccccggcgagcccgcgccgaccgcc
agcctgcaggcccaggccgacgccctgcccgccgcctggcgcgcgctgctcgatccgtgc
atccaggtgccggcgtggctggagctggccgcctttgtcgatggcgagcgcgccgccggc
aagccggtgttcccgcaccacgtcttccatgcgctgcacctgacgccgcccgacgcggtc
aaggtggtgatcctgggccaggacccgtaccacggcaccggctcggtcggcggcgtggag
atgccgcaggcgcacgggctggcgttctcggtgccggagggcatcaaggtgccgcccagc
ctgcgcaatatcttcaaggaaatcgccgccgagttcggcgcggacggcaacggcccgccg
cgcacgtccggcaacctggaaggctgggcgcgccagggcgtgctgctactcaacaccgtg
ctgacggtcgagcaaggccaggcggcgagccacgcccggcgcggctgggaggcggtcacc
gactgcctgatccagcatctggcagccagccgcccgaacctggtgttcatgctgtggggc
agccacgcgcaggccaagaagccgctgctgggcgacggccattgcgtgctggaagcgccg
cacccgtcgccgctgtcggcgcaccgcggcttcctcggctgtggccacttccgcgaagcc
aactgctggctggaggcgcacggccgcgcgccggtcgaatggaccgtcgcctga
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