Cupriavidus sp. DF5525: ABNX08_020910
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Entry
ABNX08_020910 CDS
T11801
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
cupd Cupriavidus sp. DF5525
Brite
KEGG Orthology (KO) [BR:
cupd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cupd03009
]
ABNX08_020910 (rsmB)
Enzymes [BR:
cupd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
ABNX08_020910 (rsmB)
Ribosome biogenesis [BR:
cupd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
ABNX08_020910 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
XGJ17894
LinkDB
All DBs
Position
1:complement(4468484..4469902)
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AA seq
472 aa
AA seq
DB search
MRLPPDSLAFQMLGAAAAVRAVSEGTALPQAIEDAAAQLRLDRVRDAATRGALQDIAYRT
MRQFGTARALVTKLVTRPPGAQVDSLLAVALALLLEHAPGPRDKQDNADKDQQDGGAGRP
GYSTFTVVDQAVSAAASEPKTAHARGLVNAVLRRFLRERKALLADVNRDEQARWNLPPWW
LRMLREAYPDQWMTLAASANVRPPMTVRVNTARTSVQQYQTDLANAGLAGTVVGPQAVRL
IRAVPVTQLPGFAEGVVSVQDAGAQLAAPLLEVADGMRVLDACAAPGGKTGHLLELADID
VTAVESDPQRAVRIGENLARLGREAKIVVGDASRPSDWWDGQPFDRILADVPCSASGIVR
RHPDIRWLRRDTDIAKLITEQRRIVSQLWPLLKPGGILVYVTCSIFPTEGEEQARWFGAQ
LADAIRLQAPGQLLPGTRTTQMAGEQGEKEAGQASLPSDHDGFFYARFQKRA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcctcccgattcgcttgccttccagatgctcggcgccgccgccgcggtacgt
gccgtcagcgaaggcaccgccttgccgcaggcgatcgaggacgccgctgcgcagctgcgc
ctggaccgcgtgcgcgatgctgccacgcgcggtgcgctgcaggacatcgcctatcgcacc
atgcgccagttcggcaccgcgcgcgcgctggtgacgaagctggtcacgcgcccgcccggc
gcgcaggtcgattcgctgctggccgtggcgctggccttgctgctggaacacgcgccgggc
ccgcgcgacaagcaggacaatgcagacaaagaccagcaggacgggggcgcgggccgcccc
ggctacagcaccttcacggtcgtcgaccaggcggtgagcgccgccgcctccgaacccaag
accgcgcacgcgcgcggcctggtcaatgcggtgctgcgccgcttcctgcgcgaacgcaag
gcgctgctggccgacgtcaaccgcgacgagcaggcacgctggaacctgccgccgtggtgg
ctgcgcatgctgcgcgaggcctaccccgaccaatggatgacgcttgccgccagcgccaac
gtgcgcccgccaatgacggtgcgcgtgaacaccgcgcgcacctcggtccagcaataccag
accgacctcgccaatgccggcctggccggcaccgtggtcggcccgcaggccgtgcggctg
atccgcgcagtgccggtaacgcagttgccgggctttgccgaaggcgtggtgtcggtgcag
gatgccggcgcgcaactggccgcaccgctgctggaagtggccgacggcatgcgcgtgctc
gacgcctgcgccgcgcccggcggcaagaccggccacctgctggagctcgccgatatcgac
gtgaccgcagtggagagcgacccgcaacgcgccgttcgcatcggcgagaacctggcccgc
ctgggcagggaagcaaagatcgtggtgggcgatgccagccggccctcagactggtgggac
ggccagccattcgaccgcatcctggccgacgtgccgtgctcggcctcgggcatcgtgcgg
cgccatcccgatatccgctggctgcgccgcgacaccgatatcgccaagctgatcaccgaa
cagcgccgcatcgtctcgcagctgtggccgctgctcaaaccgggcggcatcctggtctac
gtcacctgttctattttcccaacggaaggcgaggagcaggcgcgctggtttggtgcacag
ctggcagatgcgatacgattgcaggcgccggggcagctgctgcccggcacccgaaccacg
caaatggctggcgaacaaggtgaaaaggaagccggccaggccagcctgccatcggatcac
gatggcttcttctacgcccgctttcagaaacgcgcctga
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