Cupriavidus sp. EM10: KLP38_04390
Help
Entry
KLP38_04390 CDS
T10452
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cupe Cupriavidus sp. EM10
Pathway
cupe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cupe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLP38_04390 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cupe03019
]
KLP38_04390 (pnp)
03016 Transfer RNA biogenesis [BR:
cupe03016
]
KLP38_04390 (pnp)
Enzymes [BR:
cupe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KLP38_04390 (pnp)
Messenger RNA biogenesis [BR:
cupe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KLP38_04390 (pnp)
Transfer RNA biogenesis [BR:
cupe03016
]
Prokaryotic type
tRNA degradation factors
KLP38_04390 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Peptidase_M13_N
DUF5813
S1_RRP5
OB_RRP5_4th
DUF4342
Motif
Other DBs
NCBI-ProteinID:
QWE95177
LinkDB
All DBs
Position
1:942790..944958
Genome browser
AA seq
722 aa
AA seq
DB search
MTMFNKIVKEFQWGQHTVRMETGEVARQASGAVIVDIEDTVVLATVVAAKSPKAGQDFFP
LTVDYIEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPLRPLFPEGFYNDVQVVIHVL
SINPEVPADIPALIASSAALAVSGIPFSGPVGAARVGYKDGQYLLNPTRSQIAASELDLV
VAGTERAVLMVESEANQLSEDVMLGAVVYGHEQMQTAINAIHELVREGGKPEWDWAPAAK
NETLIAKVSEIGLPLLQETYQLRQKSARSAKLKEVYATVQARLAEAGVEADKVEVGNVLF
DLEAKIVRGQILAGEPRIDGRDTRTVRPIEIRSSVLPRAHGSSLFTRGETQALAVATLGT
KSDEQIIDALAGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPKE
DEFAYTIRLVSEITESNGSSSMASVCGGCLALMDAGVPVKAHVAGVAMGLILEGNKFAVL
TDILGDEDHLGDMDFKVAGTDTGITALQMDIKVQGITKEIMQVALAQAREGRMHILGKMQ
EAMGHARTELSEHAPRMITMKIHPDKIREVIGKGGSTIQALTKETGTTIDIQEDGTITIA
STSTDGMAEAKRRIEGITAEAEVGKIYAGTVLKLLDFGAIVNILPGKDGLLHISEIVNER
VKDIKDWLKEGQQVRVKLIQADEKGRLRLSLKAALAEEGGSISPIAPQGDAPAAPTSPEQ
QQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgttcaacaagatcgtcaaggaattccagtggggccagcatacggtccgcatg
gaaaccggcgaagtcgcccgtcaggcatcgggtgccgtgatcgtcgacatcgaagacacc
gtggtgctggccaccgtggtggcagccaagagcccgaaggcaggccaggacttcttcccg
ctgaccgtcgactacatcgagaagacctacgccgccggcaagatcccgggtggcttcttc
aagcgtgaaggtcgtccgtcggaaaacgagacgctgacgtcgcgcctgatcgaccgtccg
ctgcgtccgctgttcccggaaggtttctacaacgacgtgcaggtggtcatccacgtgctg
tcgatcaacccggaagtgccggccgacatcccggcgctgatcgcgtcgtcggccgcgctg
gccgtgtcgggcatcccgttcagcggcccggtgggcgccgcccgcgtgggctacaaggac
ggccagtacctgctgaacccgacccgttcgcagatcgccgcgtcggaactggatctggtc
gtcgccggtaccgagcgtgccgtgctgatggtggaatcggaagccaaccagctgtcggag
gacgtgatgctgggcgccgtggtgtatggccacgagcagatgcagaccgccatcaacgcg
atccacgaactggtccgtgaaggcggcaagccggaatgggactgggcaccggcagccaag
aacgagacgctgatcgccaaggtgagcgagatcggcctgccgctgctgcaggaaacgtat
cagctgcgccagaagtcggcccgcagcgccaagctcaaggaagtctacgcaaccgtgcag
gccaggctggccgaagccggcgtggaagccgacaaggtggaagtgggcaacgtcctgttc
gacctggaagccaagatcgtgcgtggccagatcctggccggcgagccgcgtatcgacggc
cgcgacacgcgcaccgtgcgcccgatcgagatccgttcgtcggtgctgccgcgcgcccac
ggttcgtcgctgttcacgcgtggtgaaacccaggcgctggcagtggccacgctgggtacc
aagagcgacgagcagatcatcgacgcgctggctggcgaataccgcgaccgcttcatgctc
cactacaacatgcctccgttcgccaccggcgaaacgggccgcgtgggtagcccgaagcgc
cgtgagatcggccatggccgcctggccaagcgcgcactgatcccggtgctgccgaaggaa
gacgaattcgcctacacgatccgcctggtttcggaaatcaccgaatccaacggctcgtcg
tcgatggcgtcggtgtgcggcggctgcctggcactgatggacgccggcgttccggtgaag
gcgcacgtggccggcgtggccatgggcctgatcctggaaggcaacaagtttgccgtgctg
accgacatcctgggcgacgaagatcacctgggcgacatggacttcaaggtggccggtacc
gacacgggtatcacggcactgcagatggacatcaaggtgcagggcatcaccaaggaaatc
atgcaggtggcgctggcgcaagcccgtgaaggccgcatgcacatcctgggcaagatgcag
gaagcgatgggccacgcccgcaccgagctgtcggagcacgcaccgcgcatgatcacgatg
aagatccatccggacaagattcgtgaagtgatcggcaagggcggctcgaccatccaggcg
ctgaccaaggaaaccggcacgaccatcgacatccaggaagacggcacgatcacgatcgcg
tcgacgtcgaccgacggcatggccgaagccaagcgccgcatcgaaggcatcaccgccgaa
gcggaagtgggcaagatctacgccggtaccgtgctgaagctgctggacttcggtgccatc
gtgaacatcctgccgggcaaggacggtctgctgcatatctccgagatcgtcaacgagcgc
gtcaaggacatcaaggactggctgaaggaaggccagcaggttcgcgtgaagctgatccag
gccgacgagaagggtcgtctgcgcctgtcgctgaaggccgcgctggccgaagagggtggc
agcatcagcccgatcgccccgcaaggcgatgcgccggcggcaccgacctcgccggagcag
cagcagtaa
DBGET
integrated database retrieval system
