Cupriavidus sp. EM10: KLP38_10275
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Entry
KLP38_10275 CDS
T10452
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cupe Cupriavidus sp. EM10
Brite
KEGG Orthology (KO) [BR:
cupe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cupe03021
]
KLP38_10275 (rpoS)
Transcription machinery [BR:
cupe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KLP38_10275 (rpoS)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_Crp_2
HTH_20
KORA
ToxA_barrel
PRR20
Motif
Other DBs
NCBI-ProteinID:
QWE93411
LinkDB
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Position
1:complement(2134984..2136189)
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AA seq
401 aa
AA seq
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MPRQKTVSSGVVSRTRRPKQPEGKAGVATRPVDAGDTEVFEVELEPAADMVPVADEPIAP
VSRASLRNGDRNTDRADRNADRNADLSADDSDDEDEESEDDEEEGGSEAAPEPDDFRTVL
HTELAADTVQHYLNRISIKPLLSAPEELHFSTLAKGGDFSARQVMIERNLRLVVSIAKGY
LNRGVPLLDLIEEGNLGLMHAIEKFDPSRGFRFSTYATWWIRQSIERAIMNQARTVRLPV
HVIRELNQVLRAKRHLEKGGTDGRDASLEDIAHLLGKTPDEVQDVLALNEHTTSLDTPFD
LDPGSSLLDFLSDEHNAAPDQEVAHRELENLMKLWLARLSEKHRYVVERRFGLNHIEPAT
LEELAEEMGLTRERVRQIQQEALVKLKRHFASQGVRKDAVL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgccacgccagaaaactgtttcatccggagttgtcagcaggacccgtcgtcccaagcag
ccggaaggaaaggctggtgtggcaactcgccccgttgacgcgggcgacaccgaagttttc
gaggtcgaactcgaacccgcagccgacatggtgccggtggccgacgagcccatcgcgccc
gtgtcgcgcgccagcctgcgcaatggcgacaggaataccgaccgtgccgaccgcaatgcc
gaccgcaatgccgacctgagcgccgacgactcggacgacgaggacgaggaatcggaggac
gacgaggaagaaggcggcagcgaagccgcgccggagcccgacgacttccgcacggtcctg
cacacggaactggctgccgacacggtccagcactatctcaatcgcatcagcatcaagccg
ctgctttcggccccggaggaactgcatttctccacgctggccaagggcggcgatttctcg
gcccggcaggtcatgatcgagcgcaacctgcgactcgtcgtgagcatcgccaagggctac
ctgaatcgcggcgtgccgctgctcgacctgatcgaggaaggcaacctgggcctgatgcac
gcgatcgagaaattcgatccctcgcgcggtttccgcttttcgacatatgccacctggtgg
atccgccagagcatcgagcgcgcgatcatgaaccaagcgcgcaccgtgcggttgccggtg
catgtgattcgcgagctcaaccaggtcctgcgcgccaagcgtcatcttgaaaaaggtggc
accgatggccgcgacgccagcctcgaggacatcgcccacctgctcggcaagacgccggac
gaggtgcaggacgtgctggcactcaatgaacataccacctcgctggatacgccgttcgat
cttgacccgggttcgagcctgctcgatttcctgtccgacgaacataacgccgcgcccgat
caggaagtggcccaccgcgagctggaaaacctgatgaagctctggctggcgcgcttgtcg
gagaagcatcgctatgtggtggagcgccgtttcgggctcaatcacatcgagccggccacg
ctcgaggagctggccgaggaaatgggtctgacacgcgagcgcgtgcgccagatccagcag
gaagcgctggtcaagctcaaacggcatttcgcttcgcaaggtgtacgcaaggacgccgtt
ttatga
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