Cupriavidus sp. EM10: KLP38_11930
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Entry
KLP38_11930 CDS
T10452
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cupe Cupriavidus sp. EM10
Pathway
cupe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cupe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KLP38_11930 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cupe03019
]
KLP38_11930 (orn)
03009 Ribosome biogenesis [BR:
cupe03009
]
KLP38_11930 (orn)
Messenger RNA biogenesis [BR:
cupe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KLP38_11930 (orn)
Ribosome biogenesis [BR:
cupe03009
]
Eukaryotic type
Pre-60S particles
RNases
KLP38_11930 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
FTO_CTD
CTD1
Motif
Other DBs
NCBI-ProteinID:
QWE93655
LinkDB
All DBs
Position
1:complement(2492863..2493513)
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AA seq
216 aa
AA seq
DB search
MTSPAASSVKSENNLVWLDMEMTGLQPDTDRIIEVAVVVTDSELNILAEGPVLVIHQSDA
VLDGMDNWNKGTHGRSGLIDKVKASTLTEAQAEAELLAFLKRWVPASKSPMCGNSICQDR
RFMARYMPKLEAFFHYRNLDVSTLKELCKRWEPAIHRGFQKRQLHTALADILESVEELRY
YRQHFIKTPAEAAATLPATAAPATPATPATPAAPSA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgacaagccccgccgcatcctccgtcaaaagtgaaaacaaccttgtctggctggacatg
gaaatgaccggtttgcagccggataccgaccgcatcatcgaagtggcggtggtggttacc
gattccgaactgaacatcctggccgaaggcccggtgctggtgatccaccagtccgatgcg
gtcctggacggcatggacaactggaacaagggcacccacggccgttcgggcctgatcgac
aaggtcaaggcgtcgacgctgaccgaagcccaggccgaggccgagctgctggccttcctg
aagcgctgggtgccggccagcaagtcgccgatgtgtggcaattcgatctgccaggaccgc
cgcttcatggcgcgctacatgcccaagctggaagcattcttccactatcgcaaccttgac
gtctcgacgctcaaggaactgtgcaagcgctgggaaccggccatccacaggggtttccag
aagcgccagctgcacacggcgctggccgatatcctggaatcggtggaagaactgcgctac
taccgccagcacttcatcaagaccccggccgaagccgccgcgacgctgccggcaacggct
gcccccgccacacccgctacacctgctacgccggccgctccctccgcgtaa
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