Cupriavidus sp. EM10: KLP38_12100
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Entry
KLP38_12100 CDS
T10452
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cupe Cupriavidus sp. EM10
Pathway
cupe03030
DNA replication
cupe03410
Base excision repair
cupe03420
Nucleotide excision repair
cupe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cupe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KLP38_12100 (polA)
03410 Base excision repair
KLP38_12100 (polA)
03420 Nucleotide excision repair
KLP38_12100 (polA)
03440 Homologous recombination
KLP38_12100 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cupe03032
]
KLP38_12100 (polA)
03400 DNA repair and recombination proteins [BR:
cupe03400
]
KLP38_12100 (polA)
Enzymes [BR:
cupe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KLP38_12100 (polA)
DNA replication proteins [BR:
cupe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KLP38_12100 (polA)
DNA repair and recombination proteins [BR:
cupe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KLP38_12100 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KLP38_12100 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
PA1414
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QWE93680
LinkDB
All DBs
Position
1:complement(2530068..2532875)
Genome browser
AA seq
935 aa
AA seq
DB search
MSDSPKTLLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAQYIACV
FDAKGKTFRDDMYPAYKEHRPSMPEDLARQIEPIHEAVRALGWPIVVVEGVEADDVIGTL
ACQATQQGVRTVVSTGDKDLAQLVNDSVTLVNTMSGEVLDPPGVQTKFGVPPERIVDYLS
LIGDAVDNVPGVPKVGPKTAVKWLTEYGTLDNIMAGADGIKGVVGENLRNTLDWLPRARE
LVTVKTDCDLSDAVADFHALHDLGEDKDKLVAFFQRYGFKTWLREATGESLPNARAAAAR
AAPQPAQGGLFDAAPTAADDQPAEDLAPAEIRYETVTTEEALEAWLQKVVDAPLVAIDTE
TTSLDPMLAELVGVSVSVEPGEAAYIPVAHRGPDVAGVENHGQLPREFVLDKLRAWLEDP
SRLKLGQHLKYDAHVFMNHGITLRGIAHDTMLESYVLASYRNHGMDSLAERLLSLKTITY
EEVCGKGASQIGFDQIDLQRATEYAAEDADVTLRLHRKMLPQLERAEGLKYVYEGIEIPV
SVVLQKIERNGVLIDADKLAAQSASLGQRMLEAEQAAHEAAGQPFNLGSPKQIGEILFNQ
MQLPVVKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRALSKLKSTYTDKLPRMVNPKTG
RVHTSYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFIAGPGNVIVSADYSQIELRI
MAHISGDDNLLRAFANGEDIHRATAAEIFAVEREAVTSEQRRYAKVINFGLIYGMSAFGL
ASNLGIEREAAKHYIDRYFMRYPGVANYMEETRQKAREQGYVETVFGRRLWLPDIRGGNG
PRRQAAERAAINAPMQGTAADLIKLSMIAVQDWLETDRLGSRQIMQVHDELVLEVPQAEF
DLVKTKLPELMCSVATLNVPLVAEVGSGANWEEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagtccaaaaacactcttgctcgtcgatgggtcgagctatctgtatcgcgcg
tatcacgcgctgccggacctgaggaatggcgaaggtctgcccacaggggcaatctacggc
atgatcaacatgttgcgcaagctgcgcaacgattacccggcacagtatatcgcctgcgta
ttcgacgccaagggcaagacgttccgggatgatatgtaccccgcatacaaggagcatcgc
ccgtcgatgcccgaggacctggcccgccagatcgagccgatccacgaggccgtgcgcgcg
ctgggctggccgatcgtggtcgtcgaaggcgtggaagccgacgacgtgatcggcacgctg
gcctgccaggccacgcagcagggcgtgcgtacagtggtatccacgggcgacaaggatctg
gcgcagctggtcaacgacagcgtcacgctggtcaacacgatgagcggcgaagtcctggac
ccgcccggcgtgcagaccaagttcggcgtgccgcccgagcgcatcgtcgactatctgtcg
ctgatcggcgatgccgtggacaacgtgcccggggtgccgaaggtgggcccgaagacggcg
gtcaaatggctgaccgaatacggcacgctcgacaacatcatggccggtgccgatggcatc
aagggcgtggtgggcgagaacctgcgcaatacgctggactggctgccgcgcgcccgcgaa
ctggtcacggtcaagaccgactgcgatctcagcgacgccgtggccgacttccacgcgctg
cacgacctgggcgaggacaaggacaagctggtcgcgttcttccagcgctatggcttcaag
acgtggctgcgcgaagccaccggcgaatcgctgccgaatgcgcgcgccgccgcagcccgc
gccgcgccgcagccggcgcagggcggtctgttcgatgcggcaccgaccgccgccgacgac
cagcccgccgaggacctggcgccggccgaaatccgctacgagactgtcaccaccgaagaa
gcgctggaagcctggctgcagaaggttgtcgacgcgccgctggtggcgatcgatacggaa
accacgtcgctcgatccgatgctggccgaactggtgggcgtctctgtgtcggtggagccg
ggcgaggcggcctacatccccgtggcccatcgcggccccgacgtggccggcgtggagaac
cacggccagctgccgcgcgagttcgtgctggacaagctgcgcgcgtggctggaagacccg
tcgcggctgaagctgggccagcacctgaagtacgacgcgcacgtcttcatgaaccacggc
atcacgctgcgcggcatcgcgcacgacacgatgctggaaagctacgtgctggcgtcgtac
cgcaaccatggcatggacagcctggccgagcgcctgctgagcctgaagacgatcacctat
gaagaggtgtgcggcaagggcgccagccagatcggtttcgaccagatcgacctgcagcgt
gccacggagtacgcggccgaggacgccgacgtgacgctgcgcctgcatcgcaagatgctg
ccgcaactggagcgggccgagggcctgaagtacgtctacgaaggcatcgagatcccggtt
tcggtggtgctgcagaagatcgagcgcaacggcgtgctgatcgatgccgacaagctggcc
gcgcagagcgcctcgctgggccagcgcatgctggaggccgagcaagccgcgcacgaggcc
gccggccagccgttcaacctgggctcgccgaagcagatcggcgagatcctgttcaaccag
atgcagctgccggtggtgaagaagaccgccagcggcgcgccgtcgaccgacgaagaggtg
ctgcagaagctggccgaggactacccgctgcccaagctgctgctggactaccgggcgctg
tccaagctcaagtctacctacaccgacaagctgcccaggatggtcaacccgaagaccggc
cgcgtgcacaccagctacggccaggccacggcggtgacgggccggctggcgtcgaccgat
ccgaacctgcagaacatcccggtgcgcaccgaggaaggccgccgcatccgcgaggcgttt
atcgccgggccgggcaatgtgatcgtatcggccgactattcgcagatcgagctgcgcatc
atggcgcatatctcgggcgacgataacctgctgcgcgcgtttgccaacggcgaggatatc
caccgcgccacggccgccgagatctttgccgtggagcgcgaggccgtcaccagcgagcag
cgccgctacgccaaggtcatcaacttcggcctgatctacggcatgagcgcgttcggcctg
gccagcaacctgggcatcgagcgcgaggcggccaagcactatatcgaccgctatttcatg
cgctatccgggcgtggccaactacatggaggaaacgcgccagaaggcgcgcgagcagggc
tacgtggaaaccgtgttcggccgccggctgtggctgcccgacatccgcggcggcaacggc
ccgcgccgccaggccgcggaacgcgccgccatcaacgcgccgatgcagggcacggccgcg
gacctgatcaagctgtcgatgatcgccgtgcaggactggctggagaccgacaggctggga
tcgcgccagatcatgcaggtgcacgatgaactggtgctggaagttccgcaggccgaattc
gacctggtgaagacgaagctgcccgagctgatgtgctcggtggcgacactgaacgtaccg
ctggtggccgaggtgggcagcggcgcgaactgggaagaagcgcactag
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