Cupriavidus sp. EM10: KLP38_14380
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Entry
KLP38_14380 CDS
T10452
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cupe Cupriavidus sp. EM10
Brite
KEGG Orthology (KO) [BR:
cupe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cupe03016
]
KLP38_14380
Enzymes [BR:
cupe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KLP38_14380
Transfer RNA biogenesis [BR:
cupe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KLP38_14380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
SH3_YKFC_2nd
Motif
Other DBs
NCBI-ProteinID:
QWE94044
LinkDB
All DBs
Position
1:complement(3013965..3016196)
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AA seq
743 aa
AA seq
DB search
MQLLFEEGGEIRAGTVLAQQGEAYQVELPAGKRTKVKAKDVLLQFAQPSAIEMVRQTGEL
TAEIDLDFLWECAPADEFGFGELAAEYYGADAGAVQQAALAMALHGNPVYFRRKGRGRYM
RAPEDQLKAALAAVERKKQQLLLQGEYEEQLKARKLPDAFRGKVLQLLFKPDKNSLEYKA
MDAACTALGMTPMRLMVAVGGVESPRALHEAKFLADCFPKGTGFPDVDVPEPSGDLPVAD
VQAFSIDDVTTTEIDDALSVTRMADGKLRVGIHIAAPGLGFKRGEPLDAIGRNRLSTVYF
PGDKITMLPDSVVDRYTLQEGRTCPAVSLYVTVDMDGPDGVTILGSETRAELVPIAANLR
HNLLEDVVTEQALAAGTGDYPFREALTELFRLANHLHDERQKARLASGLRPEAHNRADFN
FYIDPLAGGGERVRIEQRRRGSPLDKIVAELMILANSTWGKLLADHGVPGIYRTQKAWGM
HRTRMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQILAVAQHGVTAKLVAPFKPKDA
DLLAAVADFEGTYAAYADHQSTMERYWCLRWLAQEGRDKMMATVLKDGAVRFTEIPLVTR
VPELAQATRGTQVLLEIGTTDEISLDVSCRVLEIFAGEGEVPEEELEGDSDQDATPEEGQ
ELAEVSAEAAADAAAEEASEDAAEAGAGQDGDDASAPRDTGAHPPPESFGKRGGSRTIEV
RSGPPLPWGGRFSSAPHTDRPGS
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgttcgaagaaggcggcgagattcgcgccggcaccgtacttgcccagcag
ggcgaggcctaccaggtcgagttgcctgcgggcaagcgcaccaaggtcaaggccaaggac
gtgctgctgcagtttgcccagccttcggcaatcgaaatggtgcggcaaaccggcgagctg
accgccgagatcgatctcgacttcctctgggaatgcgcgccggccgacgaattcggcttt
ggcgagctggccgccgagtactacggtgccgacgccggcgccgtgcagcaggccgcgctg
gccatggcgctgcatggcaatcccgtctatttccgccgcaagggccgcggccgctacatg
cgcgccccggaagaccagctcaaggccgcgctggccgcggtggagcgcaagaagcagcaa
ctgctgctgcagggcgagtacgaggaacagctcaaggcgcgcaagctgccggacgcgttc
cgcggcaaggtgctgcagttgctgttcaagccggacaagaacagcctggaatacaaggcc
atggacgccgcctgcacggcgctgggcatgacgccgatgcggctgatggtggcggtgggc
ggcgtggaaagcccgcgcgcgctgcacgaggccaagttcctggccgactgcttcccgaaa
ggcaccggcttccccgacgtggacgtgccggaaccgtctggcgacctgcccgtggccgat
gtccaggcgttttccatcgacgatgtcacgaccacggaaatcgacgatgcgctgtcggtg
acgcgcatggccgacggcaagctgcgggtgggtatccacatcgccgcccctggcctcggt
ttcaaacgcggcgagccgctcgacgccatcgggcgcaaccgcctgtcgaccgtgtacttc
ccgggcgacaagatcacgatgctgcccgacagcgtggtcgaccgctacacgctgcaggaa
ggccgcacctgcccggccgtgtcgctgtatgtgacggtcgacatggacggccccgacggc
gtgaccatcctgggcagcgaaacgcgcgccgagctggtgccgatcgccgccaacctgcgc
cacaacctgctggaagacgtggtgacggagcaggcgctggccgccggcactggcgactac
ccgttccgcgaggcgctgaccgagctgttccggctggccaaccacctgcatgacgagcgc
cagaaggcgcgtctggccagtggcctgcgtccggaagcgcacaaccgcgcggacttcaac
ttctatatcgatcccctggccggcggcggagagcgcgtgcgcatcgagcagcgccgccgc
gggtcgccgctggacaagatcgtggccgagctgatgatcctggccaacagcacgtggggc
aagctgctggccgatcacggcgtgccgggcatctatcgcacgcagaaggcctggggcatg
catcgcacgcgcatgcagacctacccggcgccgcacgaaggcctgggcgtggcgcaatat
gcgtggagcacgtcgccgctgcgccgctacgtcgacctggtcaaccagtggcagatcctg
gcggtggcgcagcatggcgtcacggccaagctggtggcgccgttcaagcccaaggacgcc
gacctgctggccgccgtggccgatttcgaaggcacctacgccgcctatgccgaccatcag
tcgaccatggaacggtactggtgcctgcgctggctggcccaggagggccgcgacaagatg
atggccaccgtgctgaaggacggcgcggttcgcttcaccgagattccgctggtgacgcgc
gtgccggaactggcgcaggccacgcgcggcacgcaggtgctgctggaaatcggcacgacc
gacgagatttcgctcgacgtgtcgtgccgcgtgctggaaatcttcgccggcgagggcgag
gtgcccgaggaagaactcgagggcgacagcgaccaggacgctacgcccgaggaagggcag
gaactggccgaggtgtccgccgaagccgcggccgacgcggctgccgaggaggcctcggaa
gatgcggccgaagcgggtgccgggcaggatggcgacgatgcgtcggcgccacgcgacacc
ggcgcccaccccccgcctgagtccttcggtaaacggggcggctcccgtacaatcgaagtc
cgttccggcccccctctgccgtggggtggccggttttcgagcgcgccccataccgaccgt
ccaggttcctga
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