Cupriavidus sp. EM10: KLP38_15580
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Entry
KLP38_15580 CDS
T10452
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cupe Cupriavidus sp. EM10
Pathway
cupe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cupe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KLP38_15580 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cupe03021
]
KLP38_15580 (rpoA)
03400 DNA repair and recombination proteins [BR:
cupe03400
]
KLP38_15580 (rpoA)
Enzymes [BR:
cupe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KLP38_15580 (rpoA)
Transcription machinery [BR:
cupe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KLP38_15580 (rpoA)
DNA repair and recombination proteins [BR:
cupe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KLP38_15580 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QWE94233
LinkDB
All DBs
Position
1:complement(3274731..3275711)
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AA seq
326 aa
AA seq
DB search
MQTALLKPKIIAVEPLGDHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTIDGVQEDVVNLLLNLKGVVFKLHNRDEVTVSLRKDGEGVVTAADIELPHDVEI
INPNHVIAHLSAGGKLDMQIKVEQGRGYVPGNVRKFGDESGKVIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETDGVISPEEAIRQSARILVDQLSVFAALEGTESAAEAA
SSRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcactcctcaagccaaaaatcatcgccgtcgaaccgctgggcgaccaccac
gccaaagtcgtgatggagccgtttgaacgcggttatggccacacgcttggtaacgcgctg
cgtcgcgtcctgctgtcgtcgatggtcggctatgcgccgacagaggtcacgatcgctggg
gtcgtccacgagtattccaccatcgatggcgtccaggaagacgtcgtcaacctgctcctc
aacctgaagggcgtggtgttcaagctgcacaaccgtgacgaagtcacggtgtcgctgcgc
aaggatggcgaaggcgtggtcacggcggccgatatcgagctgccgcacgatgtcgagatc
atcaacccgaatcacgtcattgcccacctgtccgcaggcggcaagctcgacatgcagatc
aaggtcgagcaaggccgtggctacgtgccgggcaacgttcgcaagttcggcgacgagtcg
ggcaaggtgatcggccgtatcgttctggacgcctcgttctcgccggtgcgccgcgtttcg
tacgccgtggaatcggcgcgtgtggaacagcgtaccgacctggacaagctggtgatgaac
atcgaaaccgacggcgtgatctcgcccgaggaagcgattcgccagtcggcccgtatcctg
gtggaccagctgtcggtgtttgccgcgctggaaggcaccgagtcggctgccgaggccgct
tcgagccgcgcgccgcagatcgatccgatcctgctgcgcccggtggacgacctcgagctg
acggtgcgttcggccaactgcctgaaggccgaaaacatctactacatcggcgacctgatc
cagcgtaccgagaacgaactgctcaagaccccgaacctgggtcgcaagtcgctcaacgag
atcaaggaagtcctggcttcgcgtggcctgacgctcggcatgaagctcgagaactggccg
cccgcaggtctggagaagtaa
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