Cupriavidus sp. EM10: KLP38_15745
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Entry
KLP38_15745 CDS
T10452
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cupe Cupriavidus sp. EM10
Pathway
cupe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cupe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLP38_15745 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cupe03019
]
KLP38_15745 (recQ)
03400 DNA repair and recombination proteins [BR:
cupe03400
]
KLP38_15745 (recQ)
Enzymes [BR:
cupe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KLP38_15745 (recQ)
Messenger RNA biogenesis [BR:
cupe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KLP38_15745 (recQ)
DNA repair and recombination proteins [BR:
cupe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KLP38_15745 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH_5
HHH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QWE94266
LinkDB
All DBs
Position
1:complement(3295541..3297391)
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AA seq
616 aa
AA seq
DB search
MSRALAILKEVFGYHAFRGTQAEIIDHVADGGDCLVLMPTGGGKSLCYQIPALLRQQAGQ
GVGIVVSPLIALMQDQVAALTEAGVRAAVLNSTLSSSEASAVERDLLAGRLDILYVAPER
LMTPRFQDLLERTRVGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPDVPRIALTATAD
ALTRNEIIERLSLDDARVFISSFDRPNIRYRIVEKDNARQQLLAFIKAEHMSGNGGHDSG
IVYCLSRKKVEDTAQWLASHGINALGYHAGMDAQVRQHHQARFREEEGIVMVATIAFGMG
IDKPDVRFVAQLDLPKSMEGYYQETGRAGRDGLPANAWMAYGLGDVVQQKRMIDESEADD
AHKRVSSSKLDALLGLCETAGCRRVRILAYFEESAGPCGNCDTCLEPPATWDGTREAQMA
LSCVYRTAQASRVHFGATHLIDVLRGNASEKIRQWGHDKVSTFGIGKELSVSEWHAIFRQ
LIAHGLLVIDHGGHGALLLGDPARAVLKGEQSVTLRRQVSKPGKAGERAGRGGPRTDHTA
TMDADTLSNWEALRAWRTATAKSHGVPAYVIFHDATLAELARSAPESLDELAEVPGIGAS
KLERYGEEILETLREV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcgccctggcgatccttaaagaagtcttcggctaccacgcattccgtggcacg
caggcggagatcatcgaccatgtggcggacggcggcgattgccttgtgctgatgccgacg
ggcggtggcaagtcgctctgctatcagattccggcgttgctgcgccagcaggccggccag
ggcgtgggcatcgtggtgtcgccgctgatcgcgctgatgcaggaccaggtggccgcgctg
accgaagccggtgtgcgggccgccgtgctgaattccacgctgagcagcagcgaggcctcg
gccgtcgagcgcgacctgctggccggccggctggatatcctctatgtggcgcccgagcgg
ctgatgacgccgcgcttccaggatctgctggaacgcacgcgcgtgggtttgttcgccatc
gacgaggcgcattgcgtgtcgcagtgggggcatgacttccggccggaatatatccagctg
tcggtactgcacgagcgcttcccggatgtgccgcgcattgcgctgacggccacggccgac
gcgctgacgcgcaacgagatcatcgagcggctgtcgctcgacgatgcacgcgtcttcatt
tccagcttcgaccgccccaatatccgctaccgcatcgtcgagaaggacaacgcgcggcag
cagctgctggccttcatcaaggccgagcacatgagcggcaacggcggccatgacagcggc
atcgtctattgcctgtcgcgcaagaaggtggaagacaccgcgcaatggctggccagccac
ggcatcaatgcgctgggttatcacgccggcatggatgcgcaggtccggcagcatcaccag
gcgcgcttccgcgaggaagagggcatcgtgatggtggccaccattgccttcggaatgggg
atcgacaagccagatgtgcggttcgtggcccaactggacttgcccaagagcatggaaggc
tactaccaggaaaccggccgggccggccgcgatggcttgccggccaacgcctggatggcg
tacgggctgggcgatgtggtgcagcagaagcgcatgatcgacgagtccgaggctgacgat
gcgcacaagcgcgtgtcatcgtcgaagctcgacgcgctgctgggcctgtgcgaaacggcc
ggttgccggcgcgtgcggatcctggcctatttcgaggagtcggcgggcccctgcggcaat
tgcgatacgtgtctggaaccgccggcgacgtgggacggcacgcgcgaggcgcagatggcg
ctgtcgtgcgtctaccggacggcgcaggccagccgcgtgcattttggcgcgacgcacctg
atcgatgtgctgcgcggcaatgccagcgagaagatcaggcagtgggggcacgacaaggtg
tcgacgttcggcatcggcaaggagctgtcggtgtcggaatggcatgccatcttccggcag
ctgatcgcccacggcctgctggtgatcgaccatggcggccacggcgcgctgctgctgggc
gatccggctcgggcggtgctcaagggcgagcagtcggtcacgctgcggcgccaggtcagc
aagccgggcaaggccggcgagcgggccggccgcggcgggccgcgtacagatcacacggcg
acgatggatgcggacacgctttccaactgggaggcactgcgggcctggcgcacggccacc
gccaagtcgcacggcgtgccggcgtatgtcatcttccacgacgccaccctggccgaactc
gcgcgcagcgcgccggagtcgctcgacgaactggccgaggtgcccggtattggtgcatcc
aagctcgaacgctacggcgaggaaatcctcgaaacgctgcgcgaggtgtga
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