Cupriavidus sp. EM10: KLP38_20085
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Entry
KLP38_20085 CDS
T10452
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cupe Cupriavidus sp. EM10
Pathway
cupe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cupe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KLP38_20085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cupe03021
]
KLP38_20085
Transcription machinery [BR:
cupe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KLP38_20085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_3
HTH_24
GerE
HTH_Tnp_ISL3
HTH_7
HTH_11
HTH_40
Xre-like-HTH
HTH_38
HTH_28
Rv2175c_wHTH
TnsD
HTH_17
HTH_29
Motif
Other DBs
NCBI-ProteinID:
QWE97363
LinkDB
All DBs
Position
2:649071..649580
Genome browser
AA seq
169 aa
AA seq
DB search
MAADAGPHQDIHALYSNHHRWLLGWLHRKVGCWHRSADLAQDTFMRLLAREETPSILEPR
AFLTTIAQRVMANQWRRDKLEQAYLEALALQPPALAPSVEERAILLETLQEIAELLDGLP
VPVQRAFLMAQLDGLSQAEIAASLKISVTTVKRYLIRAGTQCYFAIAAP
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgacgccggtccgcatcaggacattcacgcgctatacagcaaccaccatcgc
tggctgcttggctggctacaccgcaaggtgggctgctggcaccggtccgcggacctggcg
caggacacgttcatgcgcctgctggcccgcgaggaaaccccgtcgattcttgagccgcgc
gcattcctgaccaccatcgcgcaacgcgtgatggccaaccagtggcggcgcgacaagctc
gaacaggcctacctcgaagcgctggcgctacagccgccggcgctggcgccatcggtcgag
gaacgtgccatcctgctcgaaacgctgcaggaaatcgccgaactgctcgatggcctgccc
gtgccggtgcagcgcgccttcctgatggcgcaactggatggcctgagccaggcagaaatc
gccgccagcctgaaaatctccgtcaccaccgtcaagcgctacctgatacgcgccggcacg
cagtgttatttcgccatcgccgcgccatga
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