Cupriavidus sp. EM10: KLP38_20710
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Entry
KLP38_20710 CDS
T10452
Name
(GenBank) 3'-5' exoribonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cupe Cupriavidus sp. EM10
Pathway
cupe03030
DNA replication
cupe03430
Mismatch repair
cupe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cupe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KLP38_20710
03430 Mismatch repair
KLP38_20710
03440 Homologous recombination
KLP38_20710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cupe03032
]
KLP38_20710
03400 DNA repair and recombination proteins [BR:
cupe03400
]
KLP38_20710
Enzymes [BR:
cupe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KLP38_20710
DNA replication proteins [BR:
cupe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KLP38_20710
DNA repair and recombination proteins [BR:
cupe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KLP38_20710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Cho_C
GIY-YIG_UvrC
UvrC_M
GIY-YIG
DUF7508
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
QWE97454
LinkDB
All DBs
Position
2:798646..800262
Genome browser
AA seq
538 aa
AA seq
DB search
MTTTPEPPTYLPERLASRDAGALDALALATALARPIAFVDLETTGPDAQRDRITEIGVVE
VGPDGIHEWDTLVDPQASIPPFIQGMTGITDEMVRGQPTFASIAELLAERLQGRLFVAHN
ARFDYGFLKNEFRRAGVTFRADVLCTLRLSRSLFPSVERHGLDALIARFNLVPKGRHRAL
ADAELLWQFWQKIHGLYSVDLVESAVKTLVKHASLPAGLSETALDDVPDRPGVYLFHGDD
DALLYIGKSIHLRQRIRAHFSGDHTNPKEMRIARAVRRVDWRETGGQIGALLLEANLVKT
LRPLHNHQLRHNDELFAWEMVDGLPAPRLRSDRQVDFSRHTGLFGVFPSRATARARLRAL
AEEHRLCLVTLMLEPTARRGNPCFARQIQRCAGACTGDESRADHRVRTLAALETLTVAPW
PFDGAIAWREGEQPDQPWHVIEDWCYLGTARTLAEAEGLTALPARFDIDTYLILAPHLAS
LKATAVPLASARPFMLTVQIAPVMAKIVASIEEEPAAKPRVMPRRTTALSDIQPSLFD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacgccggaacctcccacctatctacccgaacgcctggccagccgcgacgcg
ggggcgctcgatgcccttgcgctggccaccgccctggctcgccccattgcctttgtggac
ctggagacgaccgggccggacgcccagcgcgaccggatcaccgagatcggcgtggtcgaa
gtgggcccggacggtattcacgagtgggacaccctggtcgacccccaggccagcatcccg
ccctttatccagggcatgaccgggatcaccgacgagatggtgcgcgggcagcccaccttt
gcgtcgattgccgagcttctggctgaacggctacagggccggctgttcgtcgcccacaat
gcccgcttcgactatggcttcctgaagaacgagttccgccgggctggcgtcacgtttcgt
gccgatgtcctgtgcacgttgcggctctcgcgctcgctgttcccctccgttgagcgccat
gggctcgacgccctgatcgcccgcttcaacctggtgcccaagggccgccaccgggcgctg
gccgacgccgagctgctatggcagttctggcagaagatccacggcctgtattccgtcgac
ctggtcgagtcggccgtcaagacgctggtcaagcacgccagcctgcccgccggcctgagc
gagacggcgctggacgatgtgcccgaccgccccggggtctatctgttccacggcgacgac
gacgcgctcctgtatataggaaagagcatccatctgcgccagcgcatccgcgcccatttt
tccggcgatcacaccaatcccaaggaaatgcgcatcgcccgcgccgtcaggcgtgtggat
tggcgcgagaccggtggccagatcggcgcgctgctgctggaggcgaacctcgtcaagacg
ctgcggccgctgcataaccatcagctacgccataacgacgagctgttcgcgtgggaaatg
gtcgatggcctgcccgcgccgcgcctgcggtcggaccggcaggtcgacttcagccggcac
accgggctctttggcgtttttccgagccgcgccacggcacgcgcccggttgcgcgcgctg
gccgaggaacatcggctctgcctggtcacgctgatgctcgaaccgacggcccgccgcggc
aacccatgcttcgcgcgccagatccagcgttgcgcgggggcctgtaccggcgatgaatcg
cgggccgatcatcgcgtgcggacgctggccgcgctggaaacgctgaccgtggcgccctgg
cccttcgacggtgctattgcgtggcgagagggcgagcagcccgaccagccgtggcacgtc
atcgaggactggtgctacctcggcacggcccggacgttggccgaagccgaaggactgact
gccctgccggcccgcttcgatatcgacacttatctgatcctggcgccgcacctggccagc
ctcaaggcgacggcggtgccactggcttcggctaggcccttcatgttgacggtacagatc
gcgcccgtcatggcgaagatcgtcgcgtccattgaggaagagccggccgcgaaaccgcgc
gtcatgcccagacgcacgacggcgttgtccgatatccagccatcgttgtttgactag
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