Cupriavidus sp. EM10: KLP38_26210
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Entry
KLP38_26210 CDS
T10452
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cupe Cupriavidus sp. EM10
Brite
KEGG Orthology (KO) [BR:
cupe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cupe03032
]
KLP38_26210
03400 DNA repair and recombination proteins [BR:
cupe03400
]
KLP38_26210
Enzymes [BR:
cupe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KLP38_26210
DNA replication proteins [BR:
cupe03032
]
Prokaryotic type
DNA Topoisomerases
KLP38_26210
DNA repair and recombination proteins [BR:
cupe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KLP38_26210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Ribosomal_L40e
Motif
Other DBs
NCBI-ProteinID:
QWE96594
LinkDB
All DBs
Position
2:2039912..2040985
Genome browser
AA seq
357 aa
AA seq
DB search
MTRTTIADSDSPALDAALRKAGLHHVDDSEPGIVRRRAGKGFTYLGPDGKRVDAATQARI
DALAIPPAYESVWICADPNGHLQATGRDARGRKQYLYHAEWAALRDADKYARLMAFGHAL
PRLRGRVKRDLARNGMPREKVLAAVVTLLDATLVRVGTPRYAEQNRTYGLTTLKRKHVAV
KGSRLRFQFTGKSGVTHDVSVNDARLARVVRNCADLPGQRLFKYKDSDGEVREIGSSDVN
AYLQEVTGGDFTAKDFRTWAGSVHALALLRKTPAETEAARKKAMVDVIRSVAQRLRNTMA
VCRKCYVHPDVLAAFMADALQALPAPRAGMRLRTDEARLLALLESTTTLARPARQAA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcaccaccatcgccgattccgacagccccgccctggacgccgcgctacgcaag
gcggggctgcaccatgtcgacgacagcgagcccggtatcgtccgccggcgcgccggcaag
ggcttcacctatctcggccccgacggcaagcgcgtggatgccgcaacacaggcgcgcatc
gacgcgctggcgattccgcccgcctacgaatcggtctggatctgcgccgatcccaacgga
catctgcaggccaccggccgcgatgcgcgcgggcgcaagcagtacctctaccacgcggaa
tgggccgcccttcgtgatgccgacaagtacgcgcggctgatggcgttcgggcacgcgctg
ccgcgcctgcggggtcgcgtcaagcgcgacctcgcgcgcaacggcatgccgcgcgaaaag
gtgctggccgccgtggtgacgctgcttgatgccacgctcgtgcgcgttggcacgccgcgc
tacgcggaacagaaccgtacgtatgggctcaccacgctgaagcgcaagcacgttgccgtg
aaaggcagccggctgcgcttccagttcaccggtaagagcggcgtcacgcatgacgtctcg
gtgaacgacgcgcggctggcgcgggtggtgcgcaattgcgccgacctgccgggccagcga
cttttcaagtacaaggacagcgacggcgaagtgcgcgagatcggctcgtccgacgtcaat
gcctacctgcaggaagtgaccggcggcgatttcaccgccaaggacttccgcacctgggca
ggcagcgtgcatgcgctggcgctgctgcgcaagacgcccgccgaaaccgaggcggcgcgc
aagaaggcgatggtcgacgtaatccgcagcgtggcgcagcggctgcgcaacacaatggcc
gtctgccgcaagtgctatgtgcatcccgacgtgctggcggcgttcatggcagacgcgttg
caggctttaccggcaccgcgtgcaggcatgcgcctgcgtaccgacgaggcacggttgctg
gccctcctggaaagcaccaccacgctggcgcgacccgcgcggcaggcggcctga
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