Cupriavidus sp. EM10: KLP38_26560
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Entry
KLP38_26560 CDS
T10452
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cupe Cupriavidus sp. EM10
Pathway
cupe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cupe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KLP38_26560
09124 Replication and repair
03420 Nucleotide excision repair
KLP38_26560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cupe03021
]
KLP38_26560
03036 Chromosome and associated proteins [BR:
cupe03036
]
KLP38_26560
03400 DNA repair and recombination proteins [BR:
cupe03400
]
KLP38_26560
Enzymes [BR:
cupe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KLP38_26560
Transcription machinery [BR:
cupe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KLP38_26560
Chromosome and associated proteins [BR:
cupe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
KLP38_26560
DNA repair and recombination proteins [BR:
cupe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KLP38_26560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
FJX1_middle
ResIII
Motif
Other DBs
NCBI-ProteinID:
QWE96645
LinkDB
All DBs
Position
2:complement(2108969..2111302)
Genome browser
AA seq
777 aa
AA seq
DB search
MSATSANSPHYTVAVRTLCEFTAKAGDLDLRFTPSPTGQEGVAGHGVVTSRRGPGYESEV
PLSGDFEGLRVRGRADGYNPVTNRVEEIKTVRGQKVEIAQNHQALHWAQAKIYGWLLCAS
RELKQIDVALVYFDIVSQQERVLKERFEADALREFFEDSCRRFMHWAEREAAHRTGRDAG
LAALAFPHGTFRDGQRLLAESVYKANASARTLMAQAPTGIGKSIGTVFPALKAMPTQRID
KVFFLSARSTGRAVALHATRQLRQNADETPLRVLELTARDKACEHPDLACHGESCPLAQG
FYDRLPAARDAASRAPLLDRATTREIARAHQVCPYYLAQEMIRWSDLVVGDYNYYFDRSA
LLYMLTAMNEWRVSVLVDEAHNLVDRGRAMYTSTLDHAAFRGVRLAAPGALKRPMDRVYR
QWNTLAKSGDAAYETRDEEPAAFVEALMQLCTAIIDDMSEHPQRHDAALERFYFDAMHFL
RLAEQMTEYGGKHSLFDITRTPRKRTGVDADLCVRNLLPAPYLAPRFAGAHSTTLFSATL
QPADYYRNLLGLPASAVSVEVPSPFQAEQLDVHVARHITTRYAQRQRSLPAIVQLMADQF
ARRPGNYLAFFSSHDYLQQAAALLAADHPGIPTWSQARGMTEAGQAGFLEAFAPGGQGIG
FAVLGGVFSEGVDLPGDRLIGAFVATLGLPQINPVNEQLRERMETVFGQGYDYAYLYPGL
RKVVQAAGRVIRTQQDRGVVWLIDDRYARSEVQALLPAWWEILTGPAAHARPVSLAE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgccacttccgccaattcgccccactataccgtcgccgtccgcaccctgtgcgag
ttcacggccaaggcgggcgacctcgacctgcgcttcacgccatcgcccaccgggcaggaa
ggcgtggccgggcatggcgtggtgaccagccggcgcgggcccgggtatgagtccgaagtg
ccgctttcgggcgatttcgagggcctgcgcgtgcgcggccgggccgatggctacaacccg
gtgaccaaccgggtcgaggaaatcaagacggtgcgcgggcagaaggtggagattgcgcag
aaccatcaggccctgcattgggcccaggccaagatctacggctggctgctgtgcgcgtcg
cgcgaactgaagcagatcgacgtggcgctggtctatttcgacatcgtcagccagcaggaa
cgcgtgctcaaggagcgattcgaagccgacgcgctgcgtgagttcttcgaggacagctgc
cgccgcttcatgcactgggccgagcgcgaggccgcgcaccgcactggccgcgatgccggg
ctggcggcgctggcgtttccgcatggcaccttccgcgacggccagcggctgctggcggaa
tcggtctacaaggccaacgcgtcggcgcgcacgctgatggcgcaggcgccgaccggcatc
ggcaagtcgatcggcacggtgtttccggcgctcaaggccatgccgacgcagcgcatcgac
aaggtattcttcctgtccgcgcgttccaccggccgcgccgtggcgctgcatgccacgcgg
cagcttcgccagaatgccgacgagacgccgctgcgcgtactggaactgaccgcgcgcgac
aaggcctgcgagcatcccgacctggcctgccatggcgaatcatgcccgctggcgcagggc
ttctacgaccgcctgcccgccgcccgcgacgccgccagccgcgcgccgctgctggaccgc
gccaccacgcgcgagatcgcccgcgcgcatcaggtgtgcccgtactacctggcccaggag
atgatccgctggagcgacctggtggtgggcgactacaactactacttcgaccgcagcgcc
ctgctgtacatgctgaccgcgatgaacgaatggcgcgtcagcgtgctggtggacgaggcg
cacaacctggtggaccggggccgtgcgatgtacacgtccacgctggaccatgcggcgttc
cgtggtgtgcggctggccgcgccgggcgcactgaagcggccgatggaccgtgtctatcgc
cagtggaacacgctggccaagtcaggcgacgcggcctatgaaacgcgcgacgaggaaccc
gccgcctttgtcgaggccctgatgcagctctgcacggccatcatcgacgacatgagcgag
catccgcagcggcatgacgccgcgctggagcggttctacttcgacgcaatgcacttcctg
cggctggccgagcagatgaccgagtacggcggcaagcattcgctgttcgacatcacgcgc
acgccgcgcaagcggacgggcgtggacgccgacctgtgcgtgcgcaacctgctgccggcg
ccgtacctggccccgcgcttcgcgggcgcgcattcgaccacgctgttttcggccacgctg
cagccggccgactactaccgcaacctgctggggctgccggccagcgcggtctcggtggag
gtgccgtcgccgttccaggccgaacagctcgacgtgcacgtggcacgccatatcaccacg
cgctacgcccagcggcagcgatcgctgcccgccatcgtgcagctgatggccgaccagttt
gcgcgacggcccggcaactacctggcgtttttcagcagtcacgactatctgcagcaggcc
gccgcgctgctggcggccgatcacccaggcattccaacgtggtcgcaggcgcgcggcatg
accgaggcaggccaggcgggctttctcgaagccttcgcgccgggcggccagggtatcggc
ttcgcggtgcttgggggcgtgttttccgaaggtgtagacctgcccggcgaccgcctgatc
ggcgccttcgtcgccacgctgggcctgccgcagatcaatcccgtcaacgagcagttgcgc
gagcgcatggaaacggtgttcgggcagggctacgactacgcctatctgtatcccggactg
cgcaaggtggtgcaggcggccggccgcgtgatccgcacccagcaggatcgcggcgtggtc
tggctgatcgacgaccgctacgcacggtccgaggtgcaggcactgttgccggcatggtgg
gaaattcttaccgggcctgcggcgcacgcgcgtccggtgtcgctggcagaatga
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