Cupriavidus sp. P-10: CTP10_R00330
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Entry
CTP10_R00330 CDS
T10694
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
cupp Cupriavidus sp. P-10
Brite
KEGG Orthology (KO) [BR:
cupp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cupp03009
]
CTP10_R00330 (dbpA)
Enzymes [BR:
cupp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CTP10_R00330 (dbpA)
Ribosome biogenesis [BR:
cupp03009
]
Prokaryotic type
rRNA helicases
CTP10_R00330 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BDB22707
LinkDB
All DBs
Position
1:42756..44177
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AA seq
473 aa
AA seq
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MNSTPVQAPPQPQAGPAFSTLPLSPAMLATLAQLGYDEMTPIQAASLPITLAGQDLVAQA
KTGSGKTAAFALALLNRLDPRRFDVQAMVLCPTRELADQVTQEIRRLARAEENIKVLALC
GGSPMRPQVDSLIHGAHIVVGTPGRILDHIDRGSLDLAAIGTLVLDEADRMLDMGFFDDI
AYIASRCPKERQTLLFSATYPEGIDKLAHKFLRKPQSLKLEATHDNATIRQRFYEVEEGE
RLGAVGRLLDHFRPASTLAFCNTKARCRELVELLRAQGYEALALHGDLEQRDRDQVLVQF
ANRSCSVLVATDVAARGLDIAQLEAVINVEITPDPEVHVHRIGRTGRADQEGWAFSLVSM
DEMGRVGNLEQHHGGEFEWHPLAELTPASSDRLLPPMVTLQMLGGRKEKIRAGDILGALT
GEAGFTKEQIGKINVLEMSTYIAVERSIGREAVKRLNAGKVKGKKVKVRLMTE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgacccctgtccaagcacccccccagccgcaagccggccccgctttttccacc
ctcccgctgtcgcccgccatgctcgccacgctggcgcaactcggctatgacgagatgacg
ccgatccaggcggccagcctgccgatcacgctggccggccaggacctggtcgcgcaggcc
aagaccggcagcggcaagaccgcggcgttcgcgctggcgctgttgaaccggctcgaccca
cgccgcttcgatgtgcaggccatggtgctgtgccccacgcgcgaactggccgaccaggtc
acgcaggaaatccgccgcctcgcgcgcgccgaagagaacatcaaggtgctggcgctgtgc
ggcggctccccgatgcgcccgcaggtggatagtcttattcacggcgcgcatattgtggtg
ggcacgccgggccgaattcttgatcatatcgatcgcggcagcctggacctggcggcaatc
ggcacgctggtgctcgacgaagccgaccgcatgctcgacatgggtttcttcgacgatatc
gcctacatcgccagccgttgcccgaaggaacgccagacgctgctgttctcggcgacctat
cccgagggcatcgacaagctcgcccacaaattcctgcgcaagccgcagtcgctgaagctg
gaagcgacgcacgacaacgccaccatccgccagcgcttctatgaagtggaagaaggtgag
cgcctgggcgcggtcgggcggctgctcgatcatttccgcccggccagcacgctggcgttc
tgcaatacgaaggcgcgctgccgcgaactggtggagctgctgcgcgcgcagggctacgag
gcgctggccctgcatggcgacctggagcagcgcgatcgcgaccaggtgctggtgcagttt
gccaaccgcagctgttcggtgctggttgccaccgacgtggccgcgcgcgggctggatatc
gcgcaactggaagcggtgatcaatgtcgagatcacgcccgaccccgaggtgcacgtgcac
cgcatcggccgcaccggccgcgccgaccaggaaggctgggcgttcagcctggtcagcatg
gacgagatggggcgtgtaggtaacctggaacagcaccacggtggcgagttcgaatggcat
ccgctggccgagctgacgcccgcgagcagtgatcggctgctgccgccgatggtgacgctg
cagatgcttggcggccgcaaggagaagatccgcgccggcgatatcctgggcgcgctgacc
ggcgaggctggctttaccaaggagcagatcggcaagatcaacgtgctggagatgtcgacc
tatatcgcggtggagcgcagcatcgggcgcgaggcggtgaagcggctgaatgcgggcaag
gtcaagggcaagaaggtgaaggtgcgtctgatgacggagtaa
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