Cupriavidus sp. P-10: CTP10_R07830
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Entry
CTP10_R07830 CDS
T10694
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cupp Cupriavidus sp. P-10
Pathway
cupp03030
DNA replication
cupp03430
Mismatch repair
cupp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cupp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTP10_R07830 (dnaE)
03430 Mismatch repair
CTP10_R07830 (dnaE)
03440 Homologous recombination
CTP10_R07830 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cupp03032
]
CTP10_R07830 (dnaE)
03400 DNA repair and recombination proteins [BR:
cupp03400
]
CTP10_R07830 (dnaE)
Enzymes [BR:
cupp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTP10_R07830 (dnaE)
DNA replication proteins [BR:
cupp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CTP10_R07830 (dnaE)
DNA repair and recombination proteins [BR:
cupp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CTP10_R07830 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BDB23452
LinkDB
All DBs
Position
1:845728..849192
Genome browser
AA seq
1154 aa
AA seq
DB search
MDGIVRLEDAVKAAAADGMGALALTDLANAFGLIRYYKEARGKGVKPVLGADVWLTNAED
RDKPSRLLLLVQDRRGYLNLCMLLSRAWLGNQHRGRAEIDPAWFLEPGEDDMPLATGLIA
LSGAMGGDVGMALGNGNLDGARRAAQHWSSVFPQRFYIELQRAGHAGTDAYVQQAVQLAA
ELQLPVVATHPVQFMTPDDYTAHEARVCIAEGELLANPRRTRRFTTDQYFKTQDEMCALF
ADIPSALENAVEIARRCNLTLELGKPRLPLFPTPDGMSLDDYLVFMAKDGLEKRLAVLFP
DEAVREAKRPEYYARLEFETGTIIKMGFPGYFLIVADFINWAKNNGVPVGPGRGSGAGSL
VAYALGITDLDPLKYALLFERFLNPERVSMPDFDIDFCQHGRDRVITYVKEKYGKDAVSQ
IATFGTMAAKAAVRDVGRVLDLGYGFVDGIAKLIPFKPGKLVTIEEAKKEEPLLTERENN
EEEVRQLLELAQRVEGMTRNVGMHAGGVLIAPGRLTDFCPLYTQGAQNDGMSGVVSQYDK
DDVEAAGLVKFDFLGLTTLTILDWAERYIRRLDPSKNDWNCSHIPLDDSPAFDILKTANT
VAVFQLESRGMQGMLKDAKPDRFEDIIALVALYRPGPMDLIPSFCARKHGREKVEYPDPR
VEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAQHRVMFREGAD
KNGLSSQQADDIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAANMSLAMD
DTDKVKILYEDCKLNKIAVLPPDVNASEYRFAPTDPKTIRYGLGGIKGSGQGAIEDILRA
REEGGAFKDLFDFCERVDRRQVNRRTMEALIRAGAFDSLNDNRAQLLASVPIAMEAAEQK
AESANQVSLFDLMGDAGEAHRPELLDEPRWSPKRTLQEEKQALGYYFSGHLFDAYRDEVR
RFNKGTLASLEKEVQGNGGGFGRDVRGKTIAGVISGIRTQMTQRGKMLIVTLDDGTGVVE
MTVFNEVFDANRQMFREDELLIATGNARHDTFTGGVRFTAESVMDLTAARIRFASAVRLA
MNGNSSTGMLRELLMPHLARATGAQGLPVRIGYEARTASCEAVLGPDWQVVPSDEALGAL
RQALSAESVSTLYD
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
gtggacggtatcgtccgcctggaggacgccgtcaaggccgctgccgccgatggcatgggc
gcgctcgccctgacagacctcgccaacgctttcgggttgatccgttattacaaggaggcg
cgcggcaagggcgtgaagccggtgcttggggccgatgtctggctgaccaatgcggaggac
cgcgacaagccttcgcgcctgctgctgctggtgcaggaccgccgtggttacctgaacctg
tgcatgctgctgtcgcgcgcgtggctgggcaaccagcatcgaggccgcgccgagatcgac
ccggcctggttcctcgagccgggcgaggacgacatgccgctggccactggcctgattgca
ctgtccggagcgatgggcggcgacgtcggcatggcgctgggcaacggcaacctcgatggc
gcgcgccgcgccgcgcagcactggtcgtcggtgttcccgcagcgcttctatatcgagctg
cagcgcgccggccatgccggcaccgatgcctacgtgcagcaggccgtgcagcttgccgcc
gagctgcaactcccggtggttgccacgcatccggtgcagttcatgacgccggacgactac
accgcacacgaggcgcgcgtgtgcatcgccgagggcgaactgctggccaatccgcgccgc
acgcgacgcttcaccaccgaccagtatttcaagacccaggacgagatgtgcgcgctgttc
gcggacatcccctcggcgctggagaacgcggtcgagatcgcgcgccgctgcaacctgacg
ctggagctgggcaagccgcgcctgccgctgttcccgacgccggacggcatgtcgctggac
gactacctggtattcatggccaaggacggcctggaaaaacgcctggccgtgctgttcccc
gacgaagcggtgcgcgaggcgaagcgccccgaatactacgcacggctggagttcgagacc
ggcaccatcatcaagatgggcttccccggctacttcctgatcgtggcggactttatcaac
tgggccaagaacaacggcgtgccggtcgggccgggccgcggttcgggcgccggttcgctg
gtggcctatgcgctcggcattaccgacctcgatccgctcaagtacgcgctgctgttcgag
cgcttcctgaacccggaacgggtgtcgatgcctgacttcgacatcgacttctgccagcac
ggccgcgatcgcgtgatcacgtacgtgaaggaaaagtacggcaaggatgcggtgtcgcag
atcgccaccttcggcaccatggcggcgaaggccgcggtgcgcgacgtgggccgcgtgctt
gacctgggctatggctttgtcgacggcattgccaagctgatcccgttcaaaccgggcaag
ctggtcaccatcgaggaagcgaaaaaagaagagccgctgctcaccgagcgcgagaacaac
gaggaagaagtgcgccagttgctggagctggcgcagcgcgtcgaaggcatgacccgtaac
gtcggcatgcacgccggcggcgtgctgatcgcgcccggcaggctgaccgatttctgcccg
ctgtacacgcagggtgcgcagaacgacggcatgagcggcgtcgtcagccagtatgacaag
gacgacgtcgaggccgccggcctggtcaagttcgactttctgggcctgaccacgctgact
atcctggactgggccgagcgctatatccgccgcctcgacccgagcaagaacgactggaac
tgcagccatatcccgctcgacgacagccccgccttcgatatcctgaagacggccaacacg
gtcgccgtgttccagctggaaagccgcggcatgcagggcatgctgaaagacgccaagcct
gaccgcttcgaggacatcatcgcgctggtggcactctaccgcccgggcccgatggacctg
atccccagcttctgcgcgcgcaagcatgggcgcgagaaggtggagtaccccgatccgcgc
gtcgaacccgtcctgaaagagacctacggcatcatggtctaccaggagcaggtgatgcag
atggcgcagatcatcggcggctactcgctcggcggcgccgatttgctgcgccgcgcgatg
ggcaagaagaagccggaagagatggcgcagcaccgcgtcatgttccgcgaaggtgccgac
aagaacggcctgtcctcgcagcaggccgacgacatcttcgacctgatggagaagttcgcg
ggctacggcttcaacaagtcgcacgcggccgcctatgcgctgctggcgtactacacggcc
tggctcaaggctcaccatccggccgaattcatggcagccaacatgtcgctggccatggat
gacaccgacaaggtcaagatcctctacgaggattgcaagctcaacaagatcgcggtgctg
ccgccggacgtcaacgccagcgaataccgtttcgcgccgaccgatccgaagaccatccgc
tatggcctgggcggcatcaagggcagcgggcagggcgcgatcgaagacatcctgcgcgcg
cgcgaagagggtggagcgttcaaggacctgttcgacttctgcgagcgcgtcgaccgccgc
caggtcaatcgccgcaccatggaagcgctgatccgcgccggcgccttcgacagcctgaac
gacaaccgcgcccagttgctggcgtcggtgccgatcgcgatggaggccgccgagcagaag
gccgaatccgccaaccaggtctcgctgttcgacctgatgggcgatgccggcgaagcgcac
cgccccgaactgctcgacgaaccgcgctggagccccaagcggacgctgcaggaagagaag
caggcgctcggctactacttctccggccacctgttcgacgcctaccgcgacgaagtgcgc
cgcttcaacaagggcacgctggcctcgctggagaaggaagtgcagggcaacggcggcggc
ttcggccgcgacgtgcgtggcaagaccatcgccggcgtgatctccggcatccgcacgcag
atgacccagcgcggcaagatgctgatcgtgacgctggacgacggtaccggggtggtcgag
atgacggtgttcaacgaggtcttcgacgccaaccggcagatgtttcgcgaagacgaactg
ctgatcgccaccggcaatgcgcggcacgatacgttcacgggcggcgtccggttcacggcg
gagtcggtgatggacctgaccgcggcgcgcatccgcttcgcttcggcggtgcgcctggcg
atgaatggtaattcgtcgacgggcatgctgcgcgagctgttgatgccgcacctggcgcgc
gccactggtgcgcagggattgccagtgcggatcggctacgaggcccggaccgcgtcgtgc
gaagccgtgctggggccggactggcaggtggtgccgtccgacgaagcgctgggcgcgctg
cgccaggcgctgtcggcggagagcgtgagcaccctgtacgactga
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