Cupriavidus sp. P-10: CTP10_R09170
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Entry
CTP10_R09170 CDS
T10694
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cupp Cupriavidus sp. P-10
Pathway
cupp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cupp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTP10_R09170 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cupp03019
]
CTP10_R09170 (pnp)
03016 Transfer RNA biogenesis [BR:
cupp03016
]
CTP10_R09170 (pnp)
Enzymes [BR:
cupp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CTP10_R09170 (pnp)
Messenger RNA biogenesis [BR:
cupp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CTP10_R09170 (pnp)
Transfer RNA biogenesis [BR:
cupp03016
]
Prokaryotic type
tRNA degradation factors
CTP10_R09170 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
DUF5813
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
BDB23582
LinkDB
All DBs
Position
1:986462..988636
Genome browser
AA seq
724 aa
AA seq
DB search
MSMFNKIVKEFQWGQHTVRMETGEIARQAGGAVLVDVEDTVVLATVVAAKNPKPGQDFFP
LTVDYIEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPLRPLFPEGFYNEVQVVVHVI
SLNPEVPADIPALIGASAALAVSGIPFSGPVGAARVGYKDGQYLLNPTRPQIAASDLDLI
VAGTERAVLMVESEANQLSEDVMLGAVVYGHEQMQIAINAIHELVREGGKAEWDWTAAAK
NEPLIAKVTEVAQPLLQEAYQLRQKSARSQKLKEVSLKVAAALADAGVEADKVEVGNIMF
DLEAKIVRGQILNGEPRIDGRDTRTVRPIEIRSSVLPRAHGSALFTRGETQALVVATLGT
KSDEQIIDALAGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPKD
DEFAYTIRLVSEITESNGSSSMASVCGGCLALMDAGVPVKAHVAGVAMGLILEGNKFAVL
TDILGDEDHLGDMDFKVAGTDNGITALQMDIKVQGITKEIMQVALAQAKEGRLHILSNMQ
GAMGHARTELSEHAPRMITMKIHPDKIREVIGKGGSTIQALTKETGTTIDIQEDGTITIA
STSTEGMAEAKRRIEGITAEAEVGKIYNGTVLKLLDFGAIVNILPGKDGLLHISEIVNER
VKDIKDWLKEGQQVRVKLIQADEKGRLRLSLKAALAEEGGSISPINAGEGAAPAAPAGGS
EQQQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttcaacaagatcgtcaaggaattccaatggggccagcacacggtccgcatg
gaaactggcgaaatcgcccgccaggccggcggtgccgtgctggtcgatgtggaagacacc
gtagtgctggcgaccgtggtcgccgccaagaacccgaagccgggccaggacttcttcccg
ctgaccgtcgactacatcgagaagacctatgcggccggcaagatccccggcggcttcttc
aagcgtgaaggccgtccgtcggaaaacgagacgctgacctcgcgcctgatcgaccgtccg
ctgcgtccgctgttcccggaaggcttctacaacgaagtccaggtcgtggtgcacgtgatt
tcgctgaacccggaagtgcccgccgacatccccgcgctgatcggcgcgtcggccgcgctg
gccgtgtcgggcatcccgttcagcggcccggtgggcgccgcgcgcgtgggctacaaggac
ggccagtacctgctgaacccgacccgcccgcagatcgccgcttcggacctggacctgatc
gtcgccggcaccgagcgcgccgtgctgatggtggaatcggaagccaaccagctgtccgaa
gacgtgatgctgggcgccgtggtctatggccacgagcagatgcagatcgccatcaacgcc
atccatgaactggtgcgcgaaggcggcaaggccgagtgggactggaccgcggctgccaag
aacgagccgctgatcgccaaggtcaccgaagtcgcgcagccgctgctgcaggaagcctat
cagctgcgccagaagtcggcccgcagccagaagctgaaggaagtgtcgctcaaggtggcc
gccgcgctggcagacgccggtgtggaagccgacaaggtggaagtcggcaacatcatgttc
gacctggaagccaagatcgtgcgcggccagatcctgaacggcgagccgcgcatcgatggc
cgcgacacccgcaccgtgcgcccgatcgagatccgttcgtcggtgctgccgcgcgcgcac
ggctcggcgctgttcacccgcggcgagacgcaggcactggtggtggccacgctgggcacc
aagagcgacgagcagatcatcgacgcgctcgccggcgagtaccgcgaccgcttcatgctc
cactacaacatgcccccgttcgccaccggtgaaaccggccgcgtgggcagcccgaagcgc
cgcgaaatcggccacggccgcctggccaagcgcgcactgatcccggtgctgccgaaggac
gatgaattcgcctacaccatccgcctggtttcggaaatcaccgaatccaacggttcgtcg
tcgatggcttcggtctgcggcggctgcctggcactgatggacgccggcgttccggtcaag
gcgcacgtggccggcgtggccatgggcctgatcctggaaggcaacaagtttgccgtgctg
accgacatcctgggcgatgaagatcacctgggtgacatggacttcaaggttgcgggtacc
gacaacggcattaccgcgctgcagatggacatcaaggtccagggcatcaccaaggagatc
atgcaggtcgcgctggcgcaggccaaggaaggccgcctgcatatcctgtcgaacatgcag
ggagcgatgggccacgcccgcaccgagctgtcggagcacgcgccgcgcatgatcaccatg
aagatccatccggacaagatccgcgaagtgatcggcaagggcggttcgaccatccaggcg
ctgaccaaggaaaccggtaccaccatcgacatccaggaagacggcaccatcaccatcgcc
tcgacctcgaccgaaggcatggccgaagccaagcgccgcatcgaaggcatcaccgccgaa
gccgaagtgggcaagatctacaacggcaccgtgctgaagctgctggacttcggcgccatc
gtcaacatcctgccgggcaaggatggcctgctgcacatctcggaaatcgtcaacgagcgt
gtgaaggacatcaaggactggctgaaggaaggccagcaggtccgcgtcaagctgatccag
gccgacgagaagggccggctgcgcctgtcgctgaaggccgcgctggccgaagagggcggc
agcatcagcccgatcaacgctggcgaaggtgctgccccggcagcgccggccggcggctcg
gagcagcagcagtaa
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