Cupriavidus sp. P-10: CTP10_R43490
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Entry
CTP10_R43490 CDS
T10694
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cupp Cupriavidus sp. P-10
Brite
KEGG Orthology (KO) [BR:
cupp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cupp03000
]
CTP10_R43490
Transcription factors [BR:
cupp03000
]
Prokaryotic type
Helix-turn-helix
Other families
CTP10_R43490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
AAA_2
AAA_22
bpMoxR
PAS
AAA_3
GAF
MCM
Xre-like-HTH
HTH_30
NACHT
nSTAND3
AAA_7
HTH_7
HTH_17
HTH_29
IstB_IS21
HTH_28
AAA_19
ABC_tran
HTH_50
AAA_14
TsaE
HTH_23
Zeta_toxin
HTH_22
Sigma70_r4_2
PAS_8
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
BDB26944
LinkDB
All DBs
Position
2:1011407..1013296
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AA seq
629 aa
AA seq
DB search
MPPAPTSLLCDANVARREFLDGKDVPAGVVSDLIVRSWQRAARAGVRPEQRMLFSDVITH
SEVRRSEEENRTLIELAGADMEVLAGAFPSQQWIVLCTNAEGMIVSSHGRLGAGPGGPSP
LQHGRRICETGIGTNAPGCLLAEGGSAVEIRRGEHFLHELVDVVCAAAPIYDCHDRLIGV
LDITGFGVDLPAYAVSHVRAAATSIGNRTFERLPGCCIVRLHHDRRMLHTPAEGIVAVSA
DGVIVAANHTARDMLRLGNAEIGAIDIGSVFAEGMYGPGGAVQSVVRTVAGGRLHVSASE
TQRARSPGAAPRADDTGPLAGHLIADATLARAFDKASMAVGAQVPVILLGETGTGKTMLA
RALHEASRPAGSFVSINCSAIPEGLAEAELFGYADGAFTGSRRGGSAGKIEQANHGTLFL
DEIGDMPLALQTRLLSVLQERCVTRVGATKAIPVDLSVICATHRSLPELVRQGAFREDLY
FRINGMSVRVPALRDRTDLPELIAAMLQTLARGRRKALDADVMALLMSHPWPGNVRELHQ
VLRTAVALSGLSEAIRREHLDESWLDAATRATVADLLPTAGQPMLLAQAQDALIQRTLDE
LSGNRSEAARALGISRATLYRKMARAKIR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgccacccgcaccgacaagcctgctgtgcgatgccaacgttgcacggcgggagttcctc
gacggaaaggacgtgcccgccggcgtcgtgtccgacctgatcgtgcgttcgtggcaacgt
gccgcgcgcgcgggcgtgcgtcccgagcagcgcatgctgttttcggatgtcatcacgcat
agcgaagtccggcgcagcgaagaagagaaccgcacgctgatcgaactggccggcgccgac
atggaggtgctggccggcgcctttccgtcgcagcagtggatcgtgctgtgcaccaatgcc
gaaggcatgatcgtgtcatcccacgggcgcctgggcgcggggccgggcgggccgtcgccg
ctgcagcatggccggcgcatctgcgagaccggcatcggcaccaacgcgcccggctgcctg
ctggctgagggcggcagcgccgtcgagattcgccgcggcgagcatttcctgcatgaactg
gtcgacgtggtctgtgccgccgcgccgatctacgattgccacgaccgcctgatcggcgtg
ctcgatatcactggcttcggcgtcgacttgccggcctacgcggtcagccacgtgcgcgcg
gcggccacgtcgatcggcaaccgcacctttgagcggctgcctggctgctgcatcgtgcgc
ctgcaccacgaccggcgcatgctgcatacaccggcggaaggcatcgtcgcggtctccgcc
gacggcgtgatcgtggcggcaaaccataccgcgcgcgacatgctgcggctcggcaacgcc
gagatcggcgcgatcgatatcggcagcgtctttgccgaaggcatgtatggcccgggaggc
gcggtgcaaagcgtcgtgcgcacggtcgccggcgggcgcctgcatgtgtcggcaagtgaa
acccagcgtgcgcgttcccccggcgccgcgccgcgcgccgacgacaccggtccgctggct
ggccacctgattgccgatgccacgctggcgcgcgccttcgacaaggccagcatggcggtc
ggcgcgcaggtgccggtgatcctgctgggagagaccggcaccggcaagaccatgctggcg
cgcgcgctgcacgaggccagccggccggccggcagctttgtctcgatcaactgctcggcc
attcccgaagggctggccgaagccgagctgttcggctatgccgacggcgcctttaccggc
agccgccgtggcggcagcgcgggcaagatcgagcaggccaaccatggcacgctgttcctg
gacgagatcggcgacatgccgctggcattgcagacgcggctgctgagcgtgctgcaggag
cgctgcgtaacacgtgtgggcgcgaccaaggcgatccctgtcgacctgtcggtgatctgc
gccacgcaccgcagcctgccggaactggtgcggcagggcgccttccgcgaagacctgtat
ttccgcatcaacggcatgtcggtgcgcgttccagcgctgcgcgaccgcaccgacctgccc
gagctgatcgcggcgatgctgcagacgctggcgcgcggccggcgcaaggcgctcgacgcc
gacgtgatggcgctgctgatgtcgcatccctggccgggcaacgtgcgcgagctgcaccag
gtgctgcgcaccgcggtggcgctgtctggcctcagcgaggcaatccggcgcgagcatctc
gacgaaagctggctggatgcggcaacacgcgcgacggtggcggacctgctgcccacggca
ggccagccgatgctgctggcgcaggcgcaggacgcgctgatccagcgcaccctcgacgaa
ctcagcggcaaccgctccgaagccgcgcgcgcactcggcatctcgcgcgcgacgctgtac
cgcaagatggcgcgcgccaagatccgctag
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