Cupriavidus sp. P-10: CTP10_R45890
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Entry
CTP10_R45890 CDS
T10694
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cupp Cupriavidus sp. P-10
Pathway
cupp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cupp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CTP10_R45890
09124 Replication and repair
03420 Nucleotide excision repair
CTP10_R45890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cupp03021
]
CTP10_R45890
03036 Chromosome and associated proteins [BR:
cupp03036
]
CTP10_R45890
03400 DNA repair and recombination proteins [BR:
cupp03400
]
CTP10_R45890
Enzymes [BR:
cupp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CTP10_R45890
Transcription machinery [BR:
cupp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CTP10_R45890
Chromosome and associated proteins [BR:
cupp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CTP10_R45890
DNA repair and recombination proteins [BR:
cupp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CTP10_R45890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
FJX1_middle
DUF3458_C
Motif
Other DBs
NCBI-ProteinID:
BDB27184
LinkDB
All DBs
Position
2:1280146..1282413
Genome browser
AA seq
755 aa
AA seq
DB search
MVAVRALCEFTAKAGDLDLRFVPTPTAQEGVAGHALVTGRRGPGYQAEVSLSADFGPLHV
RGRADGYDPVANRLEEIKTVRGDAAVPDNHRHLHWAQAKIYGCLLCRKLGLPGLDVAVVY
FDIVGQREHPVVEHFTADALGAFFVQTCERFLQWAQAELAHRQARDAALARLAFPHPAFR
TGQRELAQAVYNANRAGRTLLAQAPTGIGKSIGTLFPLLKAMPGQGIDKAFFLSARSTGR
GVALHAAQALRNHGAQPLRVIELVARDKACEHPELACHGESCPLARGFYDRLPAAREAAC
EVPVRDRAAVRTLALAHGICPYYLAQELVRWSDVVVADYNYYFDRSALLYALTVVNGWRA
GVLVDEAHNLVERGRAMYTAGLDPQALREARRGAPAAVARPLARLARHWSALARQADDAY
EVLPDVPAPLRRALDDCCAAVLAQMTEHPAAIDPALQRFYFDALHFSRLAEQLDANSLFD
IQRPARAAGPTRPGRGNHARLCLRNVIPAPFLRPRFAAAHSVTLFSATLDPAAFYLDTLG
LPADCARVVVPSPFRAEQLSVRIASRISTRYARRGQSLPAIAALMANQFRARRGNYLAFF
SSHEYLQQAVSSFTQAHPDIPHWVQSRGMDEAAQAAFLAAFVPGGEGIGFAVLGGAFAEG
VDLPGERLIGAFVATLGLPQFNAVNEQFRARMQSAFGQGYDYAYLYPGLRKVIQAAGRVI
RTQQDEGVVYLIDDRFAAAEVRRLLPEWWQIGPAA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgccgtgcgcgccttgtgcgagttcaccgccaaggccggcgacctcgacctgcgc
ttcgtgcccacaccaaccgcgcaggaaggcgtggccggccacgccctggtgaccggcagg
cgcgggccgggctaccaggcggaagtgtcactgtccgcggatttcggccccttgcatgtg
cgcggccgggccgacggctacgatccggtcgccaaccgcctcgaagaaatcaagaccgtg
cgcggagacgccgccgtgccggacaaccaccgccacctgcactgggcgcaggcaaagatc
tatggctgcctgttgtgccgcaagctcggcctgcccgggctcgacgtggccgtggtctat
ttcgacatcgtcggccagcgcgagcacccggtggtggagcatttcaccgcggacgcgctc
ggtgcgttcttcgtccagacctgcgaacgcttcctgcagtgggcccaggccgaactggct
caccggcaggcccgcgatgccgcgctggcgcggctggcttttccgcatcctgcattccgc
accggccagcgtgagctggcgcaggcggtctacaacgccaaccgcgccgggcgcaccctg
ctggcccaggcgcccacgggcatcggcaagtcaatcggcacgctgttcccgctgctcaag
gcgatgccggggcagggcatcgacaaggcgttcttcctgtcggcacgctctaccgggcgc
ggcgtggcgttgcacgcggcgcaggcactgcgcaaccatggcgcacagccgctgcgggta
atcgagctggtggcgcgcgacaaggcctgcgagcatcccgagctggcctgccatggcgaa
tcctgcccgctcgcgcgcggcttctacgaccgcctgcccgccgcgcgcgaagccgcctgc
gaggtgccggtgcgtgaccgggccgcagtgcgcacgctggcgctggcgcatggcatctgc
ccctactacctggcgcaggaactggtgcggtggagcgatgtggtcgtggcggactacaac
tattacttcgaccgcagcgcgctgctgtatgcgctgaccgtcgtcaacggctggcgcgcg
ggcgtgctggtcgacgaggcgcacaacctggtcgagcgcggccgcgccatgtacaccgct
gggctggatccgcaggcactgcgcgaagcccggcgcggcgcgcccgcggcggtggcccgg
cccctggcacggctggcacgccactggagcgcactggcgcggcaggccgacgatgcctat
gaagtcttgccggacgtgcccgcgcccctgcggcgagcgctcgacgactgctgcgccgcc
gtgctggcgcaaatgaccgagcaccccgcggcgatcgacccggcgctgcagcggttttat
ttcgatgcgctgcatttcagccggctggccgagcagctcgatgccaattcgctgttcgat
atccagcggcccgcccgcgccgccggccccacccgccccggtcgcggcaaccatgcgcgg
ctgtgcctgcgcaacgtcattccggcgccattcctgcggccgcgctttgccgcggcgcat
tccgtcacgctgttctcggcgacgctggaccccgcggcgttctatcttgatacgctgggt
ttgcccgccgactgcgcgcgcgtggtcgtgccgtcgccgttccgggccgaacagttgtcg
gtacgcatcgccagccggatttccacccgctatgcccggcgcggccagtcgctgccggct
atcgccgcgctgatggcgaaccagttccgcgcccgccgcggcaattacctggcgttcttc
agcagccacgaatacctgcagcaggccgtgtccagtttcacgcaggcccatcccgacatc
ccgcactgggtccagtcgcgcggcatggacgaggcggcgcaggccgcgttcctggccgcc
ttcgtgccgggcggcgaaggcatcggcttcgcggtactgggcggcgcctttgccgagggc
gtggacctgccgggcgagcggctgatcggcgccttcgtcgcgacgctggggctgccgcag
ttcaacgcggtcaacgaacagttccgcgcgcgcatgcagtcggccttcgggcaaggctac
gactatgcgtacctctatcccggcctgcgcaaggtgatacaggccgctggcagggtgatc
cgcacgcagcaggacgaaggcgtggtctacctgatcgacgaccgctttgccgcggcggag
gtgcgccggttgctgccggaatggtggcaaatcggcccggcggcgtag
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