Cupriavidus sp. ISTL7: IC580_01535
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Entry
IC580_01535 CDS
T10433
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
cupr Cupriavidus sp. ISTL7
Brite
KEGG Orthology (KO) [BR:
cupr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cupr03021
]
IC580_01535 (rpoH)
Transcription machinery [BR:
cupr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IC580_01535 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_26
Sigma54_CBD
RovC_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
QQE07177
UniProt:
A0A7T4Y8I3
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All DBs
Position
1:complement(343841..344770)
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AA seq
309 aa
AA seq
DB search
MNAVLSADSITMNNTLPMVPQRANSMALTLPAGLGNLDSYIQAVHRIPMLTAEEEQRLAR
ELRDHDSVEAARRLVMSHLRLVVSIARQYLGYGLPHADLIQEGNIGLMKAVKRFDPDQGV
RLVSYAIHWIKAEIHEYVLRNWRMVKVATTKAQRKLFFNLRSHKQGAHTFTPDEIDAVAR
ELNVKPEEVMEMETRLSGGDLALEGQVDDGEEEFAPIAYLADNHNEPTRVLEAKRQDRMQ
VEGLEQALTKLDPRSRRIIEARWLQVNDDGSGGATLHELADEFGVSAERIRQIESAAMKK
MKGALQAFA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcagtcctgtctgccgattcgatcaccatgaacaacaccctgccgatggtgccg
cagcgcgccaacagcatggccctgaccctgcccgccgggctgggcaatctcgacagctat
atccaggctgtccaccgtattccgatgctcaccgccgaggaggagcagcggctcgcgcgc
gaactgcgcgaccacgactcggtcgaggcggcccgccgcctggtgatgtcgcacctgcgt
ctggtcgtgtccatcgcgcgccagtacctgggctacggcctgccgcacgcggatctgatc
caggaaggcaatatcggcctgatgaaggccgtcaagcgcttcgacccggaccagggcgtg
cgcctggtgtcgtacgcaatccactggatcaaggcggagatccacgagtacgtgctgcgc
aactggcgcatggtcaaggtcgcgacaaccaaggcgcagcgcaagctgttcttcaacctg
cgcagccacaagcagggcgcccacaccttcaccccggacgagatcgacgcggttgcgcgc
gagctgaacgtcaagccggaagaagtgatggagatggaaacccgcttgtccggcggcgat
ctggcgctggaaggccaggtcgacgacggcgaggaggagttcgcgccgatcgcctatctg
gccgacaaccacaacgagccgacgcgcgtgctcgaggccaagcgccaggaccgcatgcag
gtcgagggcctggaacaggcgctgaccaagctcgatccgcgcagccgccgcatcatcgag
gcgcgctggctgcaggtcaacgacgacggctcgggcggcgccacgttgcacgaactggcc
gacgagttcggcgtctcggccgagcgcatccgccagatcgagtccgccgcgatgaagaag
atgaagggcgcgctgcaagccttcgcctga
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