Cupriavidus sp. ISTL7: IC580_08440
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Entry
IC580_08440 CDS
T10433
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cupr Cupriavidus sp. ISTL7
Pathway
cupr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cupr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IC580_08440 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cupr03400
]
IC580_08440 (xth)
Enzymes [BR:
cupr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IC580_08440 (xth)
DNA repair and recombination proteins [BR:
cupr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IC580_08440 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QQE08317
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All DBs
Position
1:1955072..1955869
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AA seq
265 aa
AA seq
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MRIASWNVNSLKIRLPQVLDWLIAQENADTPIDALCLQELKLPEDKYPLAELESAGFHSI
FVGQKTYNGVAILARNTTMPPAADVVRNIPGFEDEQQRVVAGTYGDVRLVCAYFPNGQAP
DSDKFAYKLRWLEALTAWLREELQRYPKLALLGDFNIAPEDRDVHDPAKWEGQNLVSPPE
RAAFQRLLELGFADAFRLFEQPEKSFSWWDYRMLAFRRNAGLRIDHILLSPALRERCTDC
TIDRTPRKWEQPSDHTPVVATMRLG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
ctgcggatcgcctcgtggaacgtcaactcgctgaagatccggctgccgcaggtgctcgac
tggctgatcgcgcaggaaaacgccgacacgccgatcgacgcgctgtgcctgcaggaactg
aagctgcccgaggacaagtacccgctggcggaactggagagtgccggattccacagcatc
ttcgtcggccagaagacctataacggcgtggcgatcctggcgcgcaataccacgatgccg
cccgccgccgacgtggtgcgcaatatcccgggcttcgaggacgagcagcaacgcgtggtc
gccggcacctatggcgacgtgcgcctggtctgcgcctatttccccaacggccaggcgccc
gacagcgacaagttcgcctacaagctgcgctggctcgaggcgctgaccgcgtggctgcgc
gaggaactgcagcgctatccgaagctcgcgctgctgggcgacttcaatatcgcgcccgag
gatcgcgatgtgcacgacccggccaagtgggaaggccagaacctggtctccccgccggag
cgcgccgccttccagcggctgctggaactgggcttcgccgatgcctttcggctgttcgaa
cagccggagaagagcttctcgtggtgggactaccggatgctggcgttccgccgcaatgcc
ggcctgcggatcgaccatatcctgctgtcgccggcactgcgcgagcgctgcaccgactgc
acgatcgaccgcacgccacgcaaatgggagcagccgtcggaccatacgccggtcgtcgcc
acgatgcggctcggctga
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