Cupriavidus sp. ISTL7: IC580_08540
Help
Entry
IC580_08540 CDS
T10433
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cupr Cupriavidus sp. ISTL7
Brite
KEGG Orthology (KO) [BR:
cupr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cupr03016
]
IC580_08540 (truB)
Enzymes [BR:
cupr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IC580_08540 (truB)
Transfer RNA biogenesis [BR:
cupr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IC580_08540 (truB)
Prokaryotic type
IC580_08540 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QQE05924
LinkDB
All DBs
Position
1:complement(<1984129..1985086)
Genome browser
AA seq
319 aa
AA seq
DB search
MTDSNAPRPPRLPRRDVHGVLLLDKPLGLSSNDALIRAKRLLRANKAGHTGTLDPLATGL
LPLCFGEATKFSQDLLDADKTYEATVRLGQRTSTGDAEGEVIAERPVRCDAAALNEALAR
FVGAIEQVPPMHSALKKDGRPLYEYARAGQTVERAARRVTVHGIALLGCELPAAPVFAMR
VTCSKGTYIRTLAEDIGEALGCGAHLTALRRTAVGDLTLDGAVTLEQLGEHDDAARPALL
APVDALLQRCVPVTLDAAATQRFLQGQRIAGRDLPAQAFEGLGSQQDTLARVYGGEPPRL
LGVARWREGALRPERLVRL
NT seq
958 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattccaacgctccacgtccgccccggctgccgcgccgcgacgtgcatggcgtg
ctgctgctcgacaagccgctcgggctgtcgtcgaacgatgcgctgatccgcgccaagcgg
ctgctgcgcgccaacaaggcgggccacaccggcacgctggacccgctggcgaccgggctg
ctgccgctgtgtttcggcgaggcgaccaagttctcgcaggatctgctcgatgccgacaag
acttatgaggcgacggtgcggttggggcagcggacctcgaccggcgatgcggaaggcgag
gtgatcgctgagcgtccggttcgctgcgatgccgcggcgctgaacgaagcgctggcgcgt
ttcgtcggtgcgatcgagcaggtgccgccgatgcattcggcgctgaagaaggacggccgg
ccgctgtacgagtacgcgcgcgccgggcagaccgtcgagcgcgcggcgcgccgcgtgacg
gtccacggcatcgcattgctcggctgcgagctgcccgccgcgccggtgttcgcgatgcgc
gtgacgtgcagcaagggtacctatatccggacgctggccgaggacatcggcgaggcgctc
ggttgcggcgcgcatctgaccgcgctgcggcgcaccgcggtcggcgatctgacgctggac
ggcgcggtcacgctggaacagctgggcgagcacgacgacgcggcgcggccggccttgctg
gcgccggtcgacgcgctgctgcagcgctgcgtgccggtgacgctcgacgccgccgcgacg
cagcgttttctgcagggacaacggatcgccgggcgcgatctgccggcacaggcgttcgaa
ggtctgggatcgcagcaagacacgctggcgcgcgtctatggcggcgaaccgccgcggctg
ctgggcgtggccagatggcgcgagggcgcgctgcggccggagcggttggtcagattga
DBGET
integrated database retrieval system
