KEGG   Cupriavidus sp. ISTL7: IC580_10325
Entry
IC580_10325       CDS       T10433                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cupr  Cupriavidus sp. ISTL7
Pathway
cupr03030  DNA replication
cupr03410  Base excision repair
cupr03420  Nucleotide excision repair
cupr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cupr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IC580_10325 (polA)
   03410 Base excision repair
    IC580_10325 (polA)
   03420 Nucleotide excision repair
    IC580_10325 (polA)
   03440 Homologous recombination
    IC580_10325 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cupr03032]
    IC580_10325 (polA)
   03400 DNA repair and recombination proteins [BR:cupr03400]
    IC580_10325 (polA)
Enzymes [BR:cupr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IC580_10325 (polA)
DNA replication proteins [BR:cupr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     IC580_10325 (polA)
DNA repair and recombination proteins [BR:cupr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     IC580_10325 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     IC580_10325 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5
Other DBs
NCBI-ProteinID: QQE06203
UniProt: A0A7T4Y5L4
LinkDB
Position
1:complement(2396182..2398995)
AA seq 937 aa
MSDSPKTLLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAEYSACV
FDAKGKTFRDALYPAYKEHRPSMPDDLARQIEPIHEAVRALGWPIVVVDGVEADDVIGSL
ACQATAEGIRTVVSTGDKDLAQLVNDSVTLVNTMSGEILDPAGVLAKFGVPPERIVDYLS
LIGDAVDNVPGVPKVGPKTAVKWLTEYGTLDGIIANADKIKGVVGENLRNTLEWLPRARE
LVTVKIDCDLSEPIPDFHALRDMGEDKEKLVAFFSRYGFKTWLRELTGEKLPDARAQAAA
AASRNGAGQGSLFDGPGAAAGDAAPAEAPPAEIRYETVVTESALEEWARRIERAELTCID
TETTSIDPMQAQLVGISLSVEPGIACYIPVAHQGPDVAGMEGRGQLPREFVLARLRAWLE
DPARYKVGQHLKYDVHVFANHGIALRGIRHDTMLQSYVLASHRNHGMDSLAERLLNLKTL
TYEEVCGKGVNQLCFDQIDLARATEYAAEDADVTLRLHRKMYPQLEAAGGLRFVYERIEM
PVSVVLQKIERNGVLIDAPRLAAQSAELGQRMMELEQRAYEAAGQPFNLGSPKQIGEILF
GRMQLPVVKKTSSGAPSTDEEVLQKLAEDYPLPRLLLDYRALSKLKSTYTDKLPRMVNPA
TGRVHTSYGQATAVTGRLASTEPNLQNIPVRTEEGRRIREAFIASPDHAIVSADYSQIEL
RIMAHISGDENLLGAFARGDDIHRATAAEIFGVAADAVSSEQRRYAKVINFGLIYGMSAF
GLASNLGIEREAAKHYIDRYFMRYPGVARYMEETRQTAREQGYVETVFGRRLWLPDINGG
NGPRRQAAERAAINAPMQGTAADLIKLSMIAVQDWIERESLGTRQIMQVHDELVLEVPTA
ELELVRTRLPELMCGVAELRVPLVAETGVGANWEEAH
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgtcggatagtcctaaaacactgctgctcgtcgatgggtcgagctatctgtatcgcgct
tatcacgcgctgccggatctgcgcaacggcgaaggcctgcccacgggggccatctacggc
atgatcaacatgctgcgcaagctgcgcaacgattacccggcagagtatagcgcctgcgtg
ttcgacgccaagggcaagaccttccgcgatgcgctgtaccccgcatacaaggaacatcgc
ccctcgatgcccgacgatctcgccaggcagatcgagccgatccacgaggcagtgcgcgcg
ctgggctggccgatcgtcgtcgtcgatggtgtcgaggccgacgacgtgatcggctcgctg
gcctgccaggccaccgccgaaggcatccgcaccgtggtgtcgaccggcgacaaggacctg
gcgcagctggtgaacgacagcgtcacgctggtcaatacgatgagcggcgaaatcctcgat
cctgccggcgtgctggccaagttcggcgtgccgccagagcgcatcgtcgactatctgtcg
ctgatcggcgatgcggtcgacaacgtgccgggcgtgcccaaggtcggcccgaagaccgcg
gtcaaatggctgaccgaatacggcacgctcgacggtatcatcgccaacgcggacaagatc
aagggcgtggtcggcgagaacctgcgcaatacgctcgagtggctgccgcgtgcgcgcgag
ctggtgacggtgaagatcgactgcgacctgtccgagccgatccccgatttccatgcgctg
cgcgacatgggcgaggacaaggagaagctggtcgcgttcttctcgcgctacggcttcaag
acgtggctgcgcgagctgaccggcgaaaagctgcccgacgcgcgcgcgcaggccgccgcc
gcggcctcgcgcaacggtgcgggccagggcagcctgttcgatgggcccggcgcggcagcg
ggcgacgcggcgccggccgaagcgccgccagccgagatccgctacgagaccgtggtcacc
gaatcggcgctcgaggaatgggcgcgccgcatcgaacgcgccgagctgacctgcatcgat
accgagaccacgtcgatcgatccgatgcaggcgcagctggtcggcatctcgctgtcggtc
gagcccggcatcgcctgctatatcccggttgcgcaccagggccccgatgtcgccggcatg
gaaggccgcggccagctgccacgcgagttcgtgctggcgcggctgcgcgcatggctggaa
gatccggcgcgctacaaggtcggccagcatctgaagtacgacgtccatgtgtttgccaac
cacggcatcgcgctgcggggcattcgccatgacacgatgctgcagagctacgtgctggcc
tcccaccgcaatcacggcatggacagtctcgccgaacggctgctgaacctgaagacgctg
acctacgaggaggtttgcggcaagggcgtcaaccagctgtgcttcgatcagatcgatctg
gcgcgcgcgaccgagtacgcggccgaggacgccgacgtgacgctgcgcctgcatcgcaag
atgtacccgcagctggaggcggcaggcggcctgcgcttcgtctacgagcgcatcgagatg
ccggtgtcggtggtgctgcagaagatcgagcgcaatggcgtgctgatcgatgcgccgcgc
ctggccgcgcagagcgccgaattgggtcagcgcatgatggaactggagcagcgcgcctac
gaggccgcgggccagccgttcaatctgggctcgcccaagcagatcggcgagatcctgttc
gggcggatgcagctgccggtcgtcaagaagaccagcagcggcgcaccgtcgaccgacgaa
gaggtactgcagaagctggccgaggactatccgctgccgcggctgctgctcgactatcgg
gcgctgtccaagctgaagtcgacctacaccgacaagctgccgcgcatggtgaacccggcc
accggccgtgtgcataccagctacggccaggccaccgcggtgacgggccggctggcgtcg
accgagccgaacctgcagaacatcccggtgcgcaccgaagaaggccggcgcattcgcgag
gccttcatcgcgtcgccggaccatgcaatcgtgtcggccgactattcgcagatcgagctg
cgcatcatggcccatatctcgggcgacgagaacctgctcggcgccttcgcgcgcggcgac
gacatccaccgcgcgaccgcggccgagatcttcggcgtggcggccgatgcggtcagcagc
gagcagcgccgctatgccaaggtcatcaacttcggcctgatctacggcatgagcgcgttc
ggcctggccagcaatctgggcatcgaacgggaggcggccaagcactatatcgaccgctat
ttcatgcgctatcccggcgtcgcgcgctacatggaagaaacgcgccagaccgcgcgcgag
cagggctatgtcgagaccgtgttcggccgccggctctggctgccggacatcaatggcggc
aacggcccgcgccgccaggcggccgagcgcgcggcgatcaatgcgccgatgcagggcacc
gcggccgatctgatcaagctgtcgatgatcgcggtgcaggactggatcgaacgcgagtcg
ctcggcacgcggcagatcatgcaggtgcacgacgaactggtgctggaggtgccgaccgcc
gaactcgagctggtgcgcacgcgcctgccggaactgatgtgcggcgtggccgagctgcgc
gtgccgctggtcgccgagaccggtgtcggcgcgaactgggaagaagcgcactga

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