Cupriavidus sp. ISTL7: IC580_10325
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Entry
IC580_10325 CDS
T10433
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cupr Cupriavidus sp. ISTL7
Pathway
cupr03030
DNA replication
cupr03410
Base excision repair
cupr03420
Nucleotide excision repair
cupr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cupr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IC580_10325 (polA)
03410 Base excision repair
IC580_10325 (polA)
03420 Nucleotide excision repair
IC580_10325 (polA)
03440 Homologous recombination
IC580_10325 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cupr03032
]
IC580_10325 (polA)
03400 DNA repair and recombination proteins [BR:
cupr03400
]
IC580_10325 (polA)
Enzymes [BR:
cupr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IC580_10325 (polA)
DNA replication proteins [BR:
cupr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IC580_10325 (polA)
DNA repair and recombination proteins [BR:
cupr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IC580_10325 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IC580_10325 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QQE06203
UniProt:
A0A7T4Y5L4
LinkDB
All DBs
Position
1:complement(2396182..2398995)
Genome browser
AA seq
937 aa
AA seq
DB search
MSDSPKTLLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAEYSACV
FDAKGKTFRDALYPAYKEHRPSMPDDLARQIEPIHEAVRALGWPIVVVDGVEADDVIGSL
ACQATAEGIRTVVSTGDKDLAQLVNDSVTLVNTMSGEILDPAGVLAKFGVPPERIVDYLS
LIGDAVDNVPGVPKVGPKTAVKWLTEYGTLDGIIANADKIKGVVGENLRNTLEWLPRARE
LVTVKIDCDLSEPIPDFHALRDMGEDKEKLVAFFSRYGFKTWLRELTGEKLPDARAQAAA
AASRNGAGQGSLFDGPGAAAGDAAPAEAPPAEIRYETVVTESALEEWARRIERAELTCID
TETTSIDPMQAQLVGISLSVEPGIACYIPVAHQGPDVAGMEGRGQLPREFVLARLRAWLE
DPARYKVGQHLKYDVHVFANHGIALRGIRHDTMLQSYVLASHRNHGMDSLAERLLNLKTL
TYEEVCGKGVNQLCFDQIDLARATEYAAEDADVTLRLHRKMYPQLEAAGGLRFVYERIEM
PVSVVLQKIERNGVLIDAPRLAAQSAELGQRMMELEQRAYEAAGQPFNLGSPKQIGEILF
GRMQLPVVKKTSSGAPSTDEEVLQKLAEDYPLPRLLLDYRALSKLKSTYTDKLPRMVNPA
TGRVHTSYGQATAVTGRLASTEPNLQNIPVRTEEGRRIREAFIASPDHAIVSADYSQIEL
RIMAHISGDENLLGAFARGDDIHRATAAEIFGVAADAVSSEQRRYAKVINFGLIYGMSAF
GLASNLGIEREAAKHYIDRYFMRYPGVARYMEETRQTAREQGYVETVFGRRLWLPDINGG
NGPRRQAAERAAINAPMQGTAADLIKLSMIAVQDWIERESLGTRQIMQVHDELVLEVPTA
ELELVRTRLPELMCGVAELRVPLVAETGVGANWEEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagtcctaaaacactgctgctcgtcgatgggtcgagctatctgtatcgcgct
tatcacgcgctgccggatctgcgcaacggcgaaggcctgcccacgggggccatctacggc
atgatcaacatgctgcgcaagctgcgcaacgattacccggcagagtatagcgcctgcgtg
ttcgacgccaagggcaagaccttccgcgatgcgctgtaccccgcatacaaggaacatcgc
ccctcgatgcccgacgatctcgccaggcagatcgagccgatccacgaggcagtgcgcgcg
ctgggctggccgatcgtcgtcgtcgatggtgtcgaggccgacgacgtgatcggctcgctg
gcctgccaggccaccgccgaaggcatccgcaccgtggtgtcgaccggcgacaaggacctg
gcgcagctggtgaacgacagcgtcacgctggtcaatacgatgagcggcgaaatcctcgat
cctgccggcgtgctggccaagttcggcgtgccgccagagcgcatcgtcgactatctgtcg
ctgatcggcgatgcggtcgacaacgtgccgggcgtgcccaaggtcggcccgaagaccgcg
gtcaaatggctgaccgaatacggcacgctcgacggtatcatcgccaacgcggacaagatc
aagggcgtggtcggcgagaacctgcgcaatacgctcgagtggctgccgcgtgcgcgcgag
ctggtgacggtgaagatcgactgcgacctgtccgagccgatccccgatttccatgcgctg
cgcgacatgggcgaggacaaggagaagctggtcgcgttcttctcgcgctacggcttcaag
acgtggctgcgcgagctgaccggcgaaaagctgcccgacgcgcgcgcgcaggccgccgcc
gcggcctcgcgcaacggtgcgggccagggcagcctgttcgatgggcccggcgcggcagcg
ggcgacgcggcgccggccgaagcgccgccagccgagatccgctacgagaccgtggtcacc
gaatcggcgctcgaggaatgggcgcgccgcatcgaacgcgccgagctgacctgcatcgat
accgagaccacgtcgatcgatccgatgcaggcgcagctggtcggcatctcgctgtcggtc
gagcccggcatcgcctgctatatcccggttgcgcaccagggccccgatgtcgccggcatg
gaaggccgcggccagctgccacgcgagttcgtgctggcgcggctgcgcgcatggctggaa
gatccggcgcgctacaaggtcggccagcatctgaagtacgacgtccatgtgtttgccaac
cacggcatcgcgctgcggggcattcgccatgacacgatgctgcagagctacgtgctggcc
tcccaccgcaatcacggcatggacagtctcgccgaacggctgctgaacctgaagacgctg
acctacgaggaggtttgcggcaagggcgtcaaccagctgtgcttcgatcagatcgatctg
gcgcgcgcgaccgagtacgcggccgaggacgccgacgtgacgctgcgcctgcatcgcaag
atgtacccgcagctggaggcggcaggcggcctgcgcttcgtctacgagcgcatcgagatg
ccggtgtcggtggtgctgcagaagatcgagcgcaatggcgtgctgatcgatgcgccgcgc
ctggccgcgcagagcgccgaattgggtcagcgcatgatggaactggagcagcgcgcctac
gaggccgcgggccagccgttcaatctgggctcgcccaagcagatcggcgagatcctgttc
gggcggatgcagctgccggtcgtcaagaagaccagcagcggcgcaccgtcgaccgacgaa
gaggtactgcagaagctggccgaggactatccgctgccgcggctgctgctcgactatcgg
gcgctgtccaagctgaagtcgacctacaccgacaagctgccgcgcatggtgaacccggcc
accggccgtgtgcataccagctacggccaggccaccgcggtgacgggccggctggcgtcg
accgagccgaacctgcagaacatcccggtgcgcaccgaagaaggccggcgcattcgcgag
gccttcatcgcgtcgccggaccatgcaatcgtgtcggccgactattcgcagatcgagctg
cgcatcatggcccatatctcgggcgacgagaacctgctcggcgccttcgcgcgcggcgac
gacatccaccgcgcgaccgcggccgagatcttcggcgtggcggccgatgcggtcagcagc
gagcagcgccgctatgccaaggtcatcaacttcggcctgatctacggcatgagcgcgttc
ggcctggccagcaatctgggcatcgaacgggaggcggccaagcactatatcgaccgctat
ttcatgcgctatcccggcgtcgcgcgctacatggaagaaacgcgccagaccgcgcgcgag
cagggctatgtcgagaccgtgttcggccgccggctctggctgccggacatcaatggcggc
aacggcccgcgccgccaggcggccgagcgcgcggcgatcaatgcgccgatgcagggcacc
gcggccgatctgatcaagctgtcgatgatcgcggtgcaggactggatcgaacgcgagtcg
ctcggcacgcggcagatcatgcaggtgcacgacgaactggtgctggaggtgccgaccgcc
gaactcgagctggtgcgcacgcgcctgccggaactgatgtgcggcgtggccgagctgcgc
gtgccgctggtcgccgagaccggtgtcggcgcgaactgggaagaagcgcactga
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