Cupriavidus sp. ISTL7: IC580_10350
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Entry
IC580_10350 CDS
T10433
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cupr Cupriavidus sp. ISTL7
Pathway
cupr03420
Nucleotide excision repair
cupr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cupr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IC580_10350
03430 Mismatch repair
IC580_10350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cupr03400
]
IC580_10350
Enzymes [BR:
cupr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IC580_10350
DNA repair and recombination proteins [BR:
cupr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IC580_10350
MMR (mismatch excision repair)
Other MMR factors
IC580_10350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
AbiJ_NTD5
Motif
Other DBs
NCBI-ProteinID:
QQE06207
LinkDB
All DBs
Position
1:complement(2402687..2405047)
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AA seq
786 aa
AA seq
DB search
MSDLLANLNAEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQNGRVSPAGILAVTF
TNKAAKEMQTRLSSMLPINTRGMWIGTFHGLCNRMLRAHFRDAGLPQTFSILDSQDQLSA
LKRLLKSLNVDDEKYPAKNLQYFINSAKEQGLRAADVEANDDFNRRFVDLYAAYDEQCQR
EGVVDFAELLLRCYELLRYNDAIRQHYQHRFRHVLVDEFQDTNVLQYQWLKLLAGFGTGN
AAAVFAVGDDDQSIYAFRGANVGNMRDFEHEFRVRHLIKLEQNYRSHGHILDSANHLIAH
NARRLGKNLRTDAGHGEPVRVFQAGTDGQEASWLVEEIRDQIAQGASRAEIAILYRSNAQ
SRVIEHALFSSGIPYRVYGGLRFFERAEVKHALAYLQLLENPRNDAAFARVVNFPARGIG
ARSIESLQDAARQYNCALSEAVAYVAGAAGGKLASFVRLIDQMRFETRQMTLAETVEYVI
NTSGLITHYQAEKEGQDRIENLRELVTAAQAFVVEEGYGLDAPANAIPVSRRQSLDRPLP
ALAEGDQEQQVLDPEALPEVMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKGLEF
NVVFITGLEEGLFPHENSMLDADGLEEERRLMYVAITRARERLYLSFAQSRVLHGQVRYH
IRSRFFDELPEGALKWLTPPAQSYGAQRRQSSESAWGRDWYKRAEDVPYTGSRATGGMDT
GNGYADQKRQAESGWRIGQQVFHNKFGEGVIKALEGEGADARANIEFKRHGAKWLALSVA
KLDAID
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgcttgccaatctgaacgccgaacaacttgccgccgtcacgctgccggac
gaaccggcgctgatcctggcgggcgcgggcagcggcaagacgcgggtgctgaccacgcgc
atcgcgtggctgatccagaacggccgggtgtcgccggcgggcatcctcgcggtgaccttc
accaacaaggccgccaaggagatgcagacgcggttgtcgtcgatgctgccgatcaatacg
cgcggcatgtggatcggcaccttccacgggctgtgcaaccgcatgctgcgcgcgcatttc
cgcgatgccggcctgccgcagaccttctcgatcctcgacagccaggaccagctgtccgcg
ctcaagcgcctgctgaagtcgctgaatgtcgacgacgagaagtacccggccaagaacctg
cagtacttcatcaacagcgcgaaggagcagggcctgcgcgcggccgacgtcgaggccaac
gacgacttcaaccgccgtttcgtcgatctgtatgcggcctacgacgagcagtgccagcgc
gagggcgtggtcgatttcgccgagctgctgctgcgctgctacgagctgctgcgctacaac
gacgcgatccgccagcactatcagcaccgcttccgccatgtgctggtcgacgagttccag
gacaccaacgtgctgcagtaccagtggctgaagctgctggcgggcttcggcaccggcaat
gcggcggcggtgttcgcggtcggcgacgacgaccagagcatctatgcgttccgcggcgcc
aatgtcggcaacatgcgcgacttcgagcatgaattccgcgtgcgccatctgatcaagctg
gagcagaactaccgctcgcacggccatatcctggactcggccaaccacctgattgcccac
aacgcgcgccggctcggcaagaacctgcgcaccgacgcgggccacggcgagccggtgcgg
gtgttccaggccggcaccgacgggcaggaggccagctggctggtcgaggagattcgcgac
cagatcgcgcagggggccagccgcgcggagatcgcgatcctgtatcgcagcaacgcgcag
tcgcgggtgatcgagcacgcgctgttctcctccggcattccgtatcgcgtctatggcggg
ctgcgcttcttcgaacgggccgaggtcaagcacgcgctggcctatctgcagctgctggag
aatccgcgcaacgacgccgccttcgcccgcgtggtgaacttcccggcccgcggcatcggc
gcgcgttcgatcgagtcgctgcaggacgccgcgcggcagtacaactgcgcgctgtcggag
gcggtcgcctatgtcgccggcgcggccggcggcaagctggcgtcgttcgtgcggctgatc
gaccagatgcgcttcgagacccggcagatgacgctggccgagacggtcgaatacgtgatc
aataccagcgggctgatcacgcattaccaggccgagaaggaaggccaggaccgcatcgag
aacctgcgcgaactggtgaccgcggcgcaggccttcgtggtcgaggagggctacggcctc
gacgcgccggccaatgcgatcccggtcagccgccggcagagcctcgatcgtccgctgccc
gcgctagccgagggcgaccaggagcagcaggtgctggaccccgaggcgctgcccgaagtg
atgacgccgctggtcgccttcctgacccacgcgtcgctggaggccggcgacaaccaggcc
caggccggacaggacgcggtgcagatgatgaccgtgcacgcggccaaggggctcgaattc
aatgtggtgttcatcaccggcctggaggaagggctgttcccgcacgagaacagcatgctc
gacgccgatggcctcgaggaagagcgccggctgatgtatgtggcgatcacgcgggcgcgc
gagcggctgtacctgtcgttcgcgcagagccgcgtgctgcatgggcaggtacgctaccac
atccgttcgcgcttcttcgacgagctgcccgagggcgcgctgaagtggctgacgccgccg
gcgcagagctacggcgcgcagcggcgccagtcatccgaaagcgcgtgggggcgcgactgg
tacaagcgggccgaggacgtgccctataccggcagccgcgcgaccggcggcatggatacc
ggcaacggctacgccgaccagaagcggcaggccgaatcgggctggcgcatcggccagcag
gtcttccacaacaagttcggcgagggcgtgatcaaggcgctggaaggcgagggcgccgac
gcgcgcgccaatatcgagttcaagcgccacggcgccaagtggctggcgctgtcggtggcg
aagctggacgcgatcgattga
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integrated database retrieval system
