Cupriavidus sp. ISTL7: IC580_13440
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Entry
IC580_13440 CDS
T10433
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cupr Cupriavidus sp. ISTL7
Pathway
cupr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cupr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IC580_13440 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cupr03021
]
IC580_13440 (rpoA)
03400 DNA repair and recombination proteins [BR:
cupr03400
]
IC580_13440 (rpoA)
Enzymes [BR:
cupr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IC580_13440 (rpoA)
Transcription machinery [BR:
cupr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IC580_13440 (rpoA)
DNA repair and recombination proteins [BR:
cupr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IC580_13440 (rpoA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QQE06697
UniProt:
A0A7T4Y7P5
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All DBs
Position
1:complement(3112789..3113769)
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AA seq
326 aa
AA seq
DB search
MQTALLKPKIIAVEPLGDHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTIDGVQEDVVNLLLNLKGVVFKLHNRDEVTVSLRKEGEGVVTAADIELPHDVEI
INPGHVIAHLSAGGKLDMQIKVEQGRGYVPGNVRKFGDESSKVIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETDGVISPEEAIRQSARILVDQLSVFAALEGTESSAEAA
SSRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcactcctcaagccaaaaatcatcgccgtcgagccgctgggcgatcatcac
gccaaagtcgtgatggagccgttcgagcgcggctacggccatacgctcggtaacgccctg
cgtcgcgtgctgctgtcgtcgatggtcggctatgccccgaccgaagtgacgatcgctggg
gtggtccacgaatattccaccatcgacggcgtgcaggaagacgtcgtcaacctgctgctg
aacctgaagggcgtcgtcttcaagctgcacaaccgcgacgaagtcacggtgtcgctgcgc
aaggaaggcgaaggcgtggtgacggccgccgatatcgagctgccgcacgatgtcgagatc
atcaaccccggccacgtgatcgcccatctgtcggccggcggcaagctggacatgcagatc
aaggtcgaacagggccgcggctatgtgccgggcaacgttcgcaagttcggcgacgagtcg
agcaaggtgatcggccgcatcgtgctggacgcctcgttctcgccggtgcgccgcgtctcg
tacgcggtcgagtcggcccgtgtcgagcagcgtaccgacctggacaagctggtgatgaac
atcgaaaccgacggcgtgatctcgcccgaggaagcgatccgtcaatcggcgcgcatcctg
gtcgatcagctgtccgtgttcgccgcgctggaaggcaccgagtcgtcggcggaagccgct
tcgagccgcgcgccgcagatcgatccgatcctgctgcgtccggtcgacgatctggagctg
acggtgcgctcggccaactgcctgaaggccgagaacatctactacatcggcgacctgatc
cagcgtaccgagaacgaactgctgaagaccccgaacctgggtcgcaagtcgctcaacgaa
atcaaggaagtcctcgcttcgcgtggcctgacgctcggcatgaagctcgagaactggccg
cccgctggcctggagaagtaa
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