Cupriavidus sp. ISTL7: IC580_13600
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Entry
IC580_13600 CDS
T10433
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cupr Cupriavidus sp. ISTL7
Pathway
cupr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cupr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IC580_13600 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cupr03019
]
IC580_13600 (recQ)
03400 DNA repair and recombination proteins [BR:
cupr03400
]
IC580_13600 (recQ)
Enzymes [BR:
cupr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IC580_13600 (recQ)
Messenger RNA biogenesis [BR:
cupr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IC580_13600 (recQ)
DNA repair and recombination proteins [BR:
cupr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IC580_13600 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
HHH
HHH_5
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
QQE06728
UniProt:
A0A7T4Y6L4
LinkDB
All DBs
Position
1:complement(3132291..3134150)
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AA seq
619 aa
AA seq
DB search
MSAALAILKDVFGYHAFRGRQAEIIEHVAEGGDCLVLMPTGGGKSLCYQIPALLRQRAGH
GVGIVVSPLIALMQDQVAALTEAGVRAAVLNSTLTGAEASAVERDLLAGRLEILYVAPER
LMTPRFQDLLDRTRVGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPQVPRIALTATAD
DVTRQEIVERLALHDARVFLSSFDRPNIRYRIVEKDNARQQLLAFIKAEHMAADGTHDSG
IVYCLSRRKVEETADWLRGHGINALPYHAGMDAAVRQQHQARFRDEEGLVMVATIAFGMG
IDKPDVRFVAHLDLPKSMEGYYQETGRAGRDGLPANAWMAYGLGDVVQQKRMIDESEADE
THKRVSSAKLDALLGLCETAGCRRVRILAYFGESSEPCGNCDTCLEPPATWDGTREAQMA
LSCVYRTAQASRVHFGATHLIDVLRGNATEKIRQWGHDKVSTFGIGADRSVSEWHAIFRQ
LIAHGLLVIDHGGHGALLLGESARAVLKGETSITLRRQVSKPARGERGERGGAGRGNRVD
HTAQMDEQQLANWEALRRWRTETAREHGVPAYVIFHDATLAELARSAPDSMAELAEVPGI
GAAKLERYGDELLEVLQKA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgccctggcgatactcaaggatgtcttcggctatcacgccttccgtggccgc
caggcggaaatcatcgaacacgtcgccgagggtggcgattgcctggtgctgatgccgacc
ggcggcggcaagtcgctgtgctatcagattcccgcgctgctgcgccagcgcgccggccat
ggcgtcggcatcgtggtatcgccgctgatcgcgctgatgcaggaccaggttgcggcgctg
acagaagcgggcgtgcgcgccgcggtgctcaattccacgctgaccggcgcggaggcatcg
gcggtcgagcgcgacctgctggccggccgcctcgagatcctgtacgtcgcgccggaacgg
ctgatgacgccgcgcttccaggatctgctcgatcgcacccgcgtcggcctgttcgcgatc
gacgaggcgcactgcgtgtcgcagtggggccacgacttccggccggaatacatccagctg
tcggtactgcacgagcgcttcccgcaggtgccgcgcatcgcgctgaccgcgacggccgac
gacgtgacgcggcaggagatcgtcgagcgcctggcgctgcacgacgcccgcgtcttcctg
tcgagcttcgatcgtcccaatatccgctatcgcatcgtcgagaaggacaacgcgcgccag
cagctgctggccttcatcaaggcagagcacatggccgcggacggcacccacgacagcggc
atcgtctactgcctgtcgcgccgcaaggtcgaggagaccgccgactggctgcgcggccac
ggcatcaacgcgctgccttaccacgccggcatggatgcggccgtgaggcagcagcaccag
gcgcgctttcgcgacgaggaagggctggtgatggtcgcgacgatcgccttcggcatgggc
atcgacaagccggacgtccgcttcgtcgcccacctcgacctgcccaaaagcatggagggc
tattaccaggagaccggccgggccggccgcgatggcctgccggccaatgcctggatggcc
tatgggctgggcgacgtcgtgcagcagaagcggatgatcgacgagtcggaggccgacgag
acgcacaagcgcgtgtcgtcggccaagctcgacgcgctgctgggcctgtgcgagaccgcc
ggttgccgccgcgtgcgcatcctcgcgtatttcggcgaatccagcgagccctgcggcaac
tgcgacacctgcctggagccgccggcgacctgggacggcacgcgcgaggcgcagatggcg
ctgtcctgcgtctatcggaccgcgcaggcgagccgcgtgcacttcggcgccacccatctg
atcgacgtgctgcgcggcaacgcgaccgagaagatccggcaatggggccacgacaaggtg
tcgaccttcggcatcggcgccgaccggtcggtgtcggagtggcatgcgatcttccggcag
ctgatcgcgcacggcctgctggtgatcgaccacggcggccacggagccctgctgctgggc
gaatcggcgcgggcggtgctcaagggcgagaccagcatcacgctgcgccgccaggtcagc
aagccggcgcgcggcgagcgcggcgaacggggaggggccgggcgtggcaaccgcgtggac
cataccgcccagatggatgagcagcagctggccaactgggaggcgctgcgccgctggcgc
accgagacggcgcgcgagcatggcgtgccggcctatgtgatcttccacgatgcgacgctg
gccgaactggcgcgcagcgcgcccgacagcatggcggaactggccgaggtgccgggcatc
ggcgcggccaagctggagcgctatggcgacgaattgctggaagtgctgcagaaggcatag
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