Cupriavidus sp. ISTL7: IC580_21000
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Entry
IC580_21000 CDS
T10433
Symbol
sctE
Name
(GenBank) type III secretion system translocon subunit SctE
KO
K15345
secreted effector protein SseC
Organism
cupr Cupriavidus sp. ISTL7
Brite
KEGG Orthology (KO) [BR:
cupr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cupr02000
]
IC580_21000 (sctE)
Transporters [BR:
cupr02000
]
Other transporters
Pores ion channels [TC:
1
]
IC580_21000 (sctE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
WHD_halo_double
Motif
Other DBs
NCBI-ProteinID:
QQE08655
LinkDB
All DBs
Position
2:complement(1393882..1395474)
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AA seq
530 aa
AA seq
DB search
MIGANALQPIGLVPGGERRERLDTQWEASGPGRTGPVGGSTATRVTMPVASGPAVGEADQ
ADEVARAAALAASLLKPPPPALREVDRRTAERAWDSVMDVLSGAFRAAKAASKQDEQGVQ
LALNELGSATESMHAFYRRALNPEAVLMELQVESGIFTAEMMKANLDHTLALRKEEMAAI
EEKQRKEQEAAEKQKQMQQKAGKGQVLGLVLNWAMAAAQVVTGALKIATGQPQGAIDLAA
GLVGLAKCTLQTIEMAHPELAGKLRHHIDELAKWEMGLSVVAGLASVVSVARIAKAANAI
LGTAAGELLTTGVEQGGKRISSVGVTLVNAMEKGGDAAEAASQLVKNIAQTLVDDVAVQL
RNSLRVAGGSQKLAEAFARSFTNEAVQKLVEQSLWQAARQMRGLTTEVIQSTFIDQVKKQ
LTLASMRAAVNFTAALEAASTTARVVAPAAQQITVNALRIEGANNKEEIERVMIHAMMLQ
FLIDLIGRQIKENKNALERVTQDHIDNTENITNAIGEVRDVALQAVTAGV
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtgccaatgcactacagcccatcgggctggttcccggcggggagaggcgggaa
cgcctcgatacgcagtgggaggcgagcggacccggccggaccggcccggtcggcggcagt
acggccacgcgcgtcaccatgccggtggcttcggggccggcggtcggggaggccgatcag
gccgacgaggtcgctcgagccgccgcccttgccgcttcgctgttgaagccaccgccgccg
gcgctgcgggaggttgaccggcgaaccgccgagcgcgcctgggacagcgtcatggatgtg
ttgtccggcgcgttccgtgccgcgaaggcggcttcgaagcaggacgaacagggagtgcaa
ctggcgctgaacgagctcggtagcgcgaccgaatcgatgcacgcgttctatcggcgcgcg
ctgaatcccgaggcggtgctgatggaactgcaggtcgagagcggcatcttcacggccgaa
atgatgaaggccaacctcgaccacacgctggcgctgcgcaaggaagaaatggcggcgatc
gaagagaagcaacgcaaggagcaggaggccgccgagaagcagaagcagatgcagcagaag
gcgggcaaggggcaggtcctcggcctggtgctgaactgggccatggccgccgcgcaggtc
gtgaccggcgcgttgaagatcgccaccgggcagccccagggcgccatcgacctcgcggcc
ggcctggtgggattggcgaaatgcacgctgcagaccatcgagatggctcaccccgaactc
gccggcaagcttcgccaccatatcgacgaactggcgaaatgggaaatgggcttgagcgtg
gtggccggcctcgccagcgtggtctcggtggcgaggatcgccaaggcggccaacgcgatc
ctcggcacggcagccggcgagctgctgaccaccggcgtggagcagggtggcaagcggatc
agttcggtcggcgtgacgctggtcaatgcgatggagaagggcggtgacgccgccgaggct
gcttcgcagctggtcaagaacatcgcccagaccctggtcgacgatgtcgccgtgcagctg
cgcaattcgctgcgggttgccggcggcagccagaagctggcggaggcgttcgccaggtcg
ttcaccaacgaggcggtgcagaaactggtcgagcagtcgctgtggcaggctgcccggcag
atgcgcggactgaccaccgaggtcatccagtcgaccttcatcgaccaggtcaagaagcag
ctgacgctggcgtcgatgcgtgcggcggtcaatttcacggccgcgctggaggcggcgtcg
acgacggcgcgggtggtcgcaccggcggcgcagcagatcaccgtcaatgcgctgcgcatc
gagggcgccaacaacaaggaagagatcgaacgcgtgatgatccacgcgatgatgctgcag
ttcctgatcgacttgatcggccggcagatcaaggagaacaagaacgcgctcgaacgggtc
acccaggaccatatcgacaataccgagaacatcaccaacgcaatcggtgaggttcgcgac
gtggcactgcaggcggtgaccgccggcgtttga
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