KEGG   Cupriavidus sp. ISTL7: IC580_23015
Entry
IC580_23015       CDS       T10433                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
cupr  Cupriavidus sp. ISTL7
Pathway
cupr03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cupr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    IC580_23015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cupr03400]
    IC580_23015
DNA repair and recombination proteins [BR:cupr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     IC580_23015
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QQE08943
LinkDB
Position
2:1882130..1883227
AA seq 365 aa
MPRIIWKGAISFGLVNIPVVLKAAARDNALDFDWLDERDMAPVGYQRINKKTGKPVDKDH
IVKGYQYEKGEYVLLSPEDFRQANVEATQTVDIVSFVQADQIPPYYFETPYYLEPDRRGE
KGYALLRETLRRTGRAALALVVIHNRQHLAAVLVLGDALVLNTMRWAEEVLPMDELKLPK
SSGKQQGVSAREIEMATRLVEDMQEDWNPEAYRDTYRDDLMERIEGKIAEGKTHLLTPAE
PGGEEPRKSAEVIDMMALLKESIKRRGGRGGARAEAGEDAQDGEADEQEEDEAPREPPRK
RSTGARKTARKSASRAGAKDGKEAKPASSRNSAAKSGKASASTKKTAAKRAAADSGSRSP
QRKRA
NT seq 1098 nt   +upstreamnt  +downstreamnt
gtgccgcgcatcatctggaaaggcgccatctcgtttgggctggtcaacatcccggtcgtg
ctgaaggcggccgcgcgcgacaacgcgctcgacttcgactggctcgacgagcgcgacatg
gcgccggtcggctaccagcggatcaacaagaagaccggcaagccggtcgacaaggaccat
atcgtcaagggctaccagtacgaaaagggcgaatacgtgctgctgtcgccggaggacttc
cgccaggccaacgtcgaggcgacgcagaccgtcgatatcgtcagcttcgtgcaggccgac
cagatcccgccgtactacttcgagacgccctactacctcgagccggaccggcgcggcgag
aagggctatgcgctgctgcgcgagaccctgcgccgcaccgggcgcgccgcgctggcgctg
gtggtgatccacaaccgccagcatctggcggcggtgctggtactgggcgatgcgctggtg
ctcaacaccatgcgctgggccgaggaagtgctgccgatggacgagctgaagctgcccaag
agcagcggcaagcagcagggcgtcagcgcgcgcgagatcgagatggcgacgcggctggtc
gaggacatgcaggaggactggaaccccgaggcctatcgcgatacctatcgcgacgacctg
atggagcgcatcgagggcaagatcgccgaaggcaagacgcacctgctgaccccggccgag
ccgggcggcgaggaaccgcgcaagtccgccgaggtgatcgacatgatggcgctgctgaag
gagagcatcaaacgccgtggtggccgtggcggtgcgcgggcggaggctggcgaggacgcc
caggacggagaagcggacgagcaggaagaagacgaggctccgcgcgagcccccgcgcaag
cgcagcacgggcgctcgcaagacggcgcgcaaatcggcctctcgtgccggagccaaggac
ggcaaggaagccaagccggcaagcagccgcaacagcgcggccaagtccggcaaggcgtcg
gcttcaacgaagaagaccgccgccaagcgtgccgcggccgacagcgggtcgcgcagcccg
cagcgcaagcgggcgtag

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