Corynebacterium ulcerans 210931: Cul210931_0600
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Entry
Cul210931_0600 CDS
T03414
Symbol
uvrD3
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cuq
Corynebacterium ulcerans 210931
Pathway
cuq03420
Nucleotide excision repair
cuq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cul210931_0600 (uvrD3)
03430 Mismatch repair
Cul210931_0600 (uvrD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuq03400
]
Cul210931_0600 (uvrD3)
Enzymes [BR:
cuq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cul210931_0600 (uvrD3)
DNA repair and recombination proteins [BR:
cuq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul210931_0600 (uvrD3)
MMR (mismatch excision repair)
Other MMR factors
Cul210931_0600 (uvrD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_12
ADDB_N
AAA_11
DUF5678
Rng_hyd_C
DZR
Motif
Other DBs
NCBI-ProteinID:
AIU29961
LinkDB
All DBs
Position
637359..639410
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AA seq
683 aa
AA seq
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MIDLNDLDSDQRAAASAPRGPVAILAGAGTGKTRTITYRIANLIDRGMASPNRVLAVTFT
RRAAGEMRHRLGVMGVGGVQAQTFHSAAMRQLSYFWPQVAGNLPWKLLDNKFPLVGKAAR
SVGIETTTENVRDLLGEIEWAKATLITPDRYVAHVKDRKIPAAADKIAEVYRRYEQAKTT
SEGMLLDFDDLLLHTAGAIENSTAIAEEFREQYRTFVVDEYQDVTPLQQRVLDAWLGERD
DITVVGDANQTIYSFTGATPNYLLGFSRKYPHATVVKLQRDYRSTPQVTDLANTVIGKAR
GRVAGTRLTLEGMRPPGPEPEFCTFDDEPAEARAVASRIKELLNKGVAASEIAVLYRINA
QSAAFEQALADAGIVYQVRGGGEFFQRAEIRQAMSQLVRVAQRAGTESIRGSALETLVRS
ALAPLGLTPEEPEGTQARERWQSLEALAELTVELTRATPDLDIQGLLEQLNQRASAKHPP
TMQGVTLASLHAAKGLEWDAVFLVGLVDGTLPITHAIKGGDSHIEEERRLFYVGVTRARE
HLVCSWAKARQEGGRATRKRSRFFDGIVEEPIDIAVPPRSKRSKRCRVCGASLGSPSEIV
MRRCVDCPSGVDEEVFETLKAWRLDMAKEGGVPAYIVFTDATLHAIAEASPTTTDDLLQI
SGIGQMKVEKYGSSLLETLAQFR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattgatctcaatgatctggatagcgatcaaagggctgccgctagtgctcctcgcggg
ccggtagccatccttgcgggtgccggaacgggtaagactcgaacgattacctatcggatt
gccaaccttattgatcgtggcatggctagtcctaatcgcgtactggcggtgacgtttaca
cgtcgtgctgcgggggaaatgcggcaccggctgggcgtcatgggcgtaggaggcgtacag
gcgcagacgttccactcagctgcgatgcgccagttgtcgtatttttggccgcaagtggcc
gggaatctgccgtggaaattgttggataacaagtttccgcttgtgggcaaggctgcgcgc
tcggtgggcatagaaacgacgacggaaaacgtgagagatcttctaggcgagatcgagtgg
gcaaaggctacgttgataacgcccgaccgttatgtggcgcacgtgaaggaccgtaagatt
cccgcagccgcagataaaatcgccgaggtataccgcagatatgagcaggctaaaacaaca
agtgagggcatgcttctagacttcgatgatctgttattgcacacggcgggagccattgag
aattcgactgcgattgcagaggaatttcgggagcagtaccgcacgtttgtcgttgacgaa
taccaggacgttacgccgttgcagcaacgagtgcttgacgcatggctgggggagcgcgat
gacatcactgtggtgggagacgctaaccagaccatttactcgtttacgggagcgactcct
aattatcttttggggttttcgcgtaagtatcctcacgcaacggtggtcaagttacagcga
gattataggtcgactcctcaagtaacagaccttgccaatacggtgatcgggaaagcacgg
ggccgggtggcgggcactcgattgacgttggaaggaatgcgcccgcctggcccagaacca
gaattttgcactttcgacgatgaacctgctgaggcacgcgccgtagcgagcagaattaaa
gaactcctgaacaagggagtagcagcgtcggaaatcgcggtgctttatcgaattaacgcg
cagtcggcggcttttgaacaggccctcgcggatgccgggattgtctaccaggtgcgcggt
ggcggtgagttcttccagcgcgcggagattcgtcaagccatgtctcagctggtgcgcgtc
gcacagcgtgcaggaacagagtcaattcgtggttccgccctggagaccttggtgcgctcg
gcgttagcgcctctgggattaaccccggaagaaccggaaggcacgcaggcgcgtgaacga
tggcagtctctagaggccctcgctgagctcacagtagagttgactcgagctacaccggat
ctggatatccaggggcttctagaacaactcaatcagcgggcaagcgccaaacaccctccg
acgatgcaaggagtgacattagcgtctttacatgcagctaaaggcctggagtgggatgcg
gtgtttcttgtagggcttgtcgacggcaccctcccgatcacccacgctattaagggggga
gactcgcacattgaagaggagcgtcggcttttctacgtcggtgttactcgtgccagggag
caccttgtgtgctcgtgggcaaaagctcgtcaggagggcggacgcgcgacacggaagaga
agccggttctttgacggcattgtggaagagcctatcgatatcgccgtcccaccacgcagt
aagcgttcaaagcgctgtcgtgtgtgcggcgcatccctgggctccccctcagaaatcgtg
atgagaagatgcgtcgattgcccgtcgggcgttgacgaggaggtgtttgagactctgaag
gcgtggcgtctagacatggctaaagaaggcggtgttcctgcttacatagtcttcacagac
gcaaccctgcacgctattgctgaggccagcccaacgaccacagatgacctactacagatt
tccggtatcggtcagatgaaagtagaaaagtacggcagtagcttgctggaaactttggct
caattccgctga
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