Corynebacterium ulcerans 210931: Cul210931_1331
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Entry
Cul210931_1331 CDS
T03414
Name
(GenBank) Ribonuclease j
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cuq
Corynebacterium ulcerans 210931
Pathway
cuq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cul210931_1331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuq03019
]
Cul210931_1331
Messenger RNA biogenesis [BR:
cuq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Cul210931_1331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AIU30667
LinkDB
All DBs
Position
complement(1461378..1463429)
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AA seq
683 aa
AA seq
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MTEPRNRSRKVTRKAGPPETTEAPAFQAPDASVEVSAKAEVEKKTSGEGSSNQDASSKGN
RGRSNSGRAGNGTRNGRSRRGGNPQNNKSNRGRRNVVKSMQGADLTERLPEPPKAPKNGL
RIYALGGISEIGRNMTVFEYNNKMLLVDCGVLFPSSGEPGVDLILPDFGPIEDKLDKVEA
LVVTHGHEDHIGAIPWLLKLRPDLPIYASKFTLALIAAKCREHRQRPKLIEVNEKSDINR
GPFNIRFWAVNHSIPDCLGLAIKTGAGLVIHTGDIKLDQTPTDGRPTDLPALSRFGDEGV
DLMLCDSTNATTPGVSGSEADIAPTLKRLVGDAKQRVILASFASNVYRVQAAVDAAVASG
RKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDAAKMAPHKVMLITTGTQGEPMAALS
RMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVVTSRDAKVHTSGHG
YSGELLFLYNAARPVNAMPVHGEWRHLRANKELAISTGVERDRVVLAQNGVVVDLVDGRA
RVVGQIQIGNLYVDGVTMGDIDAGVLEERTSLGEGGLIAITAVIDNRTGRLLERPTVQAK
GFSEDAVAMMPEVTELVENTMTDLAGEGENDPYRMVQQLRRRVSRFVEQKWRRKPMIMPT
VIPTTQTQVEADEEEIRATRESL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccacgtaaccgttctcgaaaggttactcgtaaagctggtccgccggagact
actgaggcaccagctttccaagcccctgatgcatctgtagaggtatctgctaaagctgag
gtggagaagaaaacttcaggcgaaggttcttccaatcaagatgctagctctaagggcaat
cgtggccgctccaactcgggacgagccggaaacggaacacgcaatggtcgttcacgccgt
ggtggcaatcctcagaataataagagcaaccgaggccgtcgtaacgtggttaaatccatg
caaggtgcggatctgaccgagcgtcttccagagcctcccaaggctcctaagaatggacta
cgcatctacgctcttggtggcatttctgaaattggtcgtaatatgaccgtttttgagtac
aacaacaaaatgttgttggttgactgcggtgttcttttcccctcgtctggtgagccaggc
gtggatttgatcttgcctgattttggtcctatcgaagacaaactagacaaggtcgaggca
ctcgttgttactcacgggcatgaggaccacattggagccattccgtggttgctgaagttg
cgtccagacctacctatctacgcttctaaatttacgttggctcttatcgctgcaaagtgt
cgtgagcaccgtcagcgtcctaagctgatcgaggtaaatgagaagtcggatattaaccgt
ggaccttttaatattcgtttctgggcagttaaccactcgatcccggattgcttaggtctt
gccattaagactggcgcaggtttggtcatccataccggtgacatcaagctcgaccagacc
ccaacagacgggcgtcctaccgatcttcctgcactgtctcgctttggtgatgagggcgtt
gacctcatgctctgtgactccaccaatgcaactacgccgggcgtttcgggatccgaagcc
gatattgcgccaactctgaagcgccttgtcggtgacgcaaaacaacgcgttatcctagcg
tcgtttgcttccaacgtctaccgcgttcaggctgcagtcgatgcagcagtagcctcgggt
cgtaaggtcgcattcaacgggcgttccatgattcgaaacatggaaatcgcggaaaagatg
ggttacctgaaggctcctcgcggaaccattgtcagcatggatgatgctgcaaagatggcg
ccgcacaaggttatgctcatcaccacgggcacgcagggtgagcccatggctgctttgtcg
cgcatggcgcgacgtgagcatcgccagatcacggttcgcgatggcgatctgattattctt
tcttcgtccttggtacctggtaacgaggaagccgtgttcggcgttattaatatgctggcg
cagattggtgcgaccgttgtgacgagccgcgatgccaaggtccatacctccggtcacggc
tactccggtgagcttttgttcctctacaacgctgctcgtccagtgaacgctatgccggtg
cacggagagtggcgccacttgcgggccaacaaggaactggcaatatccactggcgtggag
cgcgatcgtgtagttcttgcacaaaatggtgttgtcgtggacctcgttgacggacgagct
cgggtggtcgggcaaatccagatcggtaacctctacgtggatggtgtcaccatgggtgat
attgacgcgggggttctggaggagcgtacttccctaggtgaaggcggtctgatcgcaatc
acagccgtgattgataaccggaccggaaggttgctagagcgtcctactgttcaggccaag
ggcttctctgaagatgctgttgccatgatgcctgaagtcaccgagttggtagaaaacacc
atgactgacttggctggggaaggggagaatgacccctaccgcatggttcagcaactgcgt
cgtcgtgtctctcgtttcgtagagcaaaagtggcgtcgtaagccaatgattatgcctacc
gttatcccgacgactcagactcaggtggaagcggacgaagaggagattcgcgcaacgcgc
gaaagcctataa
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